Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)
Found 3 curated entries in PaperBLAST's database that match '5.5.1.27' as complete word(s).
These curated entries have 1 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query
| Pf1N1B4_398: Galactonate dehydratase (EC 4.2.1.6) is similar to: | PaperBLAST |
GCI_AGRFC / A9CEQ8: D-galactarolactone cycloisomerase; EC 5.5.1.27 from Agrobacterium fabrum | 36% id, 90% cov |
| Pf1N1B4_5693: Gluconate dehydratase (EC 4.2.1.39) is similar to: | PaperBLAST |
GCI_AGRFC / A9CEQ8: D-galactarolactone cycloisomerase; EC 5.5.1.27 from Agrobacterium fabrum | 31% id, 96% cov |
| Pf1N1B4_3383: Mandelate racemase (EC 5.1.2.2) is similar to: | PaperBLAST |
GCI_AGRFC / A9CEQ8: D-galactarolactone cycloisomerase; EC 5.5.1.27 from Agrobacterium fabrum | 30% id, 99% cov |
| Pf1N1B4_5805: Muconate cycloisomerase (EC 5.5.1.1) is similar to: | PaperBLAST |
GCI_AGRFC / A9CEQ8: D-galactarolactone cycloisomerase; EC 5.5.1.27 from Agrobacterium fabrum | 25% id, 98% cov |
| Pf1N1B4_71: Glucarate dehydratase (EC 4.2.1.40) is similar to: | PaperBLAST |
GCI_AGRFC / A9CEQ8: D-galactarolactone cycloisomerase; EC 5.5.1.27 from Agrobacterium fabrum | 26% id, 92% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory