Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)

Found 140 curated entries in PaperBLAST's database that match '6.3.1.2'.

These curated entries have 101 distinct sequences.

Running ublast with E ≤ 0.01

Found 13 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query

Pf1N1B4_1606: Glutamine synthetase type I (EC 6.3.1.2)
is similar to:		 PaperBLAST

GLN1B_PSETA / Q3V5W6: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Pseudomonas taetrolens

 94% id,
100% cov

glnA: glutamate--ammonia ligase; EC 6.3.1.2 from Escherichia coli
glnA / P0A9C5: glutamine synthetase (EC 6.3.1.2) from Escherichia coli

 70% id,
99% cov

GLN1B_SALTY / P0A1P6: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Salmonella typhimurium
glnA: glutamate--ammonia ligase; EC 6.3.1.2 from Salmonella enterica
P0A1P6: glutamine synthetase (EC 6.3.1.2) from Salmonella enterica

 69% id,
99% cov

More...

Pf1N1B4_879: Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-)
is similar to:		 PaperBLAST

PURT_ECOLI / P33221: Formate-dependent phosphoribosylglycinamide formyltransferase; 5'-phosphoribosylglycinamide transformylase 2; Formate-dependent GAR transformylase; GAR transformylase 2; GART 2; GAR transformylase T; Non-folate glycinamide ribonucleotide transformylase; Phosphoribosylglycinamide formyltransferase 2; EC 6.3.1.21 from Escherichia coli
purT / P33221: phosphoribosylglycinamide formyltransferase 2 (EC 6.3.1.21; EC 2.7.2.15) from Escherichia coli
P33221: phosphoribosylglycinamide formyltransferase 2 (EC 6.3.1.21) from Escherichia coli

 67% id,
100% cov

E8X9F0: phosphoribosylglycinamide formyltransferase 2 (EC 6.3.1.21) from Salmonella enterica

 67% id,
100% cov

purT / Q58881: phosphoribosylglycinamide formyltransferase monomer (EC 6.3.1.21) from Methanocaldococcus jannaschii

 60% id,
99% cov

More...

Pf1N1B4_4245: glutamine synthetase family protein
is similar to:		 PaperBLAST

O33342: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis

 45% id,
99% cov

P36205: glutamine synthetase (EC 6.3.1.2) from Thermotoga maritima

 31% id,
99% cov

GLNA_THET8 / Q5SIP0: Glutamine synthetase; GS; Glutamate--ammonia ligase; EC 6.3.1.2 from Thermus thermophilus

 35% id,
84% cov

More...

Pf1N1B4_2256: glutamine synthetase family protein
is similar to:		 PaperBLAST

P36687: glutamine synthetase (EC 6.3.1.2) from Pyrococcus woesei

 32% id,
97% cov

O33342: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis

 31% id,
92% cov

GLNA_THEKO / O08467: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Thermococcus kodakarensis
O08467: glutamine synthetase (EC 6.3.1.2) from Pyrococcus sp.

 33% id,
88% cov

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Pf1N1B4_3464: glutamine synthetase family protein
is similar to:		 PaperBLAST

O33342: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis

 32% id,
98% cov

GLNA_THEKO / O08467: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Thermococcus kodakarensis
O08467: glutamine synthetase (EC 6.3.1.2) from Pyrococcus sp.

 31% id,
93% cov

GLNA_THET8 / Q5SIP0: Glutamine synthetase; GS; Glutamate--ammonia ligase; EC 6.3.1.2 from Thermus thermophilus

 32% id,
87% cov

More...

Pf1N1B4_3342: glutamine synthetase family protein
is similar to:		 PaperBLAST

O33342: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis

 32% id,
94% cov

F2RM17: glutamine synthetase (EC 6.3.1.2) from Haloferax mediterranei

 30% id,
98% cov

P64246: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis

 28% id,
99% cov

More...

Pf1N1B4_4826: glutamine synthetase family protein
is similar to:		 PaperBLAST

P36687: glutamine synthetase (EC 6.3.1.2) from Pyrococcus woesei

 31% id,
97% cov

O33342: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis

 29% id,
98% cov

GLNA_METJA / Q60182: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Methanocaldococcus jannaschii
Q60182: glutamine synthetase (EC 6.3.1.2) from Methanocaldococcus jannaschii

 29% id,
98% cov

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Pf1N1B4_4354: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11)
is similar to:		 PaperBLAST

P36687: glutamine synthetase (EC 6.3.1.2) from Pyrococcus woesei

 30% id,
94% cov

GLNA3_HALMT / I3R176: Glutamine synthetase 3; GS3; Glutamate--ammonia ligase; EC 6.3.1.2 from Haloferax mediterranei
B8ZJH0: glutamine synthetase (EC 6.3.1.2) from Haloferax mediterranei

 30% id,
97% cov

P36205: glutamine synthetase (EC 6.3.1.2) from Thermotoga maritima

 29% id,
97% cov

More...

Pf1N1B4_2254: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11)
is similar to:		 PaperBLAST

P36205: glutamine synthetase (EC 6.3.1.2) from Thermotoga maritima

 30% id,
94% cov

P36687: glutamine synthetase (EC 6.3.1.2) from Pyrococcus woesei

 31% id,
89% cov

O33342: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis

 30% id,
91% cov

More...

Pf1N1B4_5853: Glutamine synthetase (EC 6.3.1.2), putative
is similar to:		 PaperBLAST

P36687: glutamine synthetase (EC 6.3.1.2) from Pyrococcus woesei

 30% id,
89% cov

C4L2T5: glutamine synthetase (EC 6.3.1.2) from Exiguobacterium sp.

 28% id,
94% cov

GLNA1_METMA / Q8PY99: Glutamine synthetase; GS; Glutamate--ammonia ligase; EC 6.3.1.2 from Methanosarcina mazei
Q8PY99: glutamine synthetase (EC 6.3.1.2) from Methanosarcina mazei

 27% id,
94% cov

More...

Pf1N1B4_2028: Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
is similar to:		 PaperBLAST

purT / Q58881: phosphoribosylglycinamide formyltransferase monomer (EC 6.3.1.21) from Methanocaldococcus jannaschii

 27% id,
95% cov

Pf1N1B4_941: D-alanine--D-alanine ligase (EC 6.3.2.4)
is similar to:		 PaperBLAST

PURT_ECOLI / P33221: Formate-dependent phosphoribosylglycinamide formyltransferase; 5'-phosphoribosylglycinamide transformylase 2; Formate-dependent GAR transformylase; GAR transformylase 2; GART 2; GAR transformylase T; Non-folate glycinamide ribonucleotide transformylase; Phosphoribosylglycinamide formyltransferase 2; EC 6.3.1.21 from Escherichia coli
purT / P33221: phosphoribosylglycinamide formyltransferase 2 (EC 6.3.1.21; EC 2.7.2.15) from Escherichia coli
P33221: phosphoribosylglycinamide formyltransferase 2 (EC 6.3.1.21) from Escherichia coli

 26% id,
53% cov

Pf1N1B4_1172: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
is similar to:		 PaperBLAST

purT / Q58881: phosphoribosylglycinamide formyltransferase monomer (EC 6.3.1.21) from Methanocaldococcus jannaschii

 27% id,
41% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 13 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory