Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)

Found 116 curated entries in PaperBLAST's database that match '6.3.1.2' as complete word(s).

These curated entries have 84 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query

Pf1N1B4_1606: Glutamine synthetase type I (EC 6.3.1.2)
is similar to:
PaperBLAST

GLN1B_PSETA / Q3V5W6: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Pseudomonas taetrolens

94% id,
100% cov

glnA: glutamate--ammonia ligase; EC 6.3.1.2 from Escherichia coli
glnA / P0A9C5: glutamine synthetase (EC 6.3.1.2) from Escherichia coli

70% id,
99% cov

GLN1B_SALTY / P0A1P6: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Salmonella typhimurium
glnA: glutamate--ammonia ligase; EC 6.3.1.2 from Salmonella enterica
P0A1P6: glutamine synthetase (EC 6.3.1.2) from Salmonella enterica

69% id,
99% cov

More...

Pf1N1B4_4245: glutamine synthetase family protein
is similar to:
PaperBLAST

O33342: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis

45% id,
99% cov

P36205: glutamine synthetase (EC 6.3.1.2) from Thermotoga maritima

31% id,
99% cov

GLNA_THET8 / Q5SIP0: Glutamine synthetase; GS; Glutamate--ammonia ligase; EC 6.3.1.2 from Thermus thermophilus

35% id,
84% cov

More...

Pf1N1B4_2256: glutamine synthetase family protein
is similar to:
PaperBLAST

P36687: glutamine synthetase (EC 6.3.1.2) from Pyrococcus woesei

32% id,
97% cov

O33342: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis

31% id,
92% cov

GLNA_THEKO / O08467: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Thermococcus kodakarensis
O08467: glutamine synthetase (EC 6.3.1.2) from Pyrococcus sp.

33% id,
88% cov

More...

Pf1N1B4_3464: glutamine synthetase family protein
is similar to:
PaperBLAST

O33342: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis

32% id,
98% cov

GLNA_THEKO / O08467: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Thermococcus kodakarensis
O08467: glutamine synthetase (EC 6.3.1.2) from Pyrococcus sp.

31% id,
93% cov

GLNA_THET8 / Q5SIP0: Glutamine synthetase; GS; Glutamate--ammonia ligase; EC 6.3.1.2 from Thermus thermophilus

32% id,
87% cov

More...

Pf1N1B4_3342: glutamine synthetase family protein
is similar to:
PaperBLAST

O33342: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis

32% id,
94% cov

F2RM17: glutamine synthetase (EC 6.3.1.2) from Haloferax mediterranei

30% id,
98% cov

P64246: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis

28% id,
99% cov

More...

Pf1N1B4_4826: glutamine synthetase family protein
is similar to:
PaperBLAST

P36687: glutamine synthetase (EC 6.3.1.2) from Pyrococcus woesei

31% id,
97% cov

O33342: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis

29% id,
98% cov

GLNA_METJA / Q60182: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Methanocaldococcus jannaschii
Q60182: glutamine synthetase (EC 6.3.1.2) from Methanocaldococcus jannaschii

29% id,
98% cov

More...

Pf1N1B4_4354: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11)
is similar to:
PaperBLAST

P36687: glutamine synthetase (EC 6.3.1.2) from Pyrococcus woesei

30% id,
94% cov

GLNA3_HALMT / I3R176: Glutamine synthetase 3; GS3; Glutamate--ammonia ligase; EC 6.3.1.2 from Haloferax mediterranei
B8ZJH0: glutamine synthetase (EC 6.3.1.2) from Haloferax mediterranei

30% id,
97% cov

P36205: glutamine synthetase (EC 6.3.1.2) from Thermotoga maritima

29% id,
97% cov

More...

Pf1N1B4_2254: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11)
is similar to:
PaperBLAST

P36205: glutamine synthetase (EC 6.3.1.2) from Thermotoga maritima

30% id,
94% cov

P36687: glutamine synthetase (EC 6.3.1.2) from Pyrococcus woesei

31% id,
89% cov

O33342: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis

30% id,
91% cov

More...

Pf1N1B4_5853: Glutamine synthetase (EC 6.3.1.2), putative
is similar to:
PaperBLAST

P36687: glutamine synthetase (EC 6.3.1.2) from Pyrococcus woesei

30% id,
89% cov

C4L2T5: glutamine synthetase (EC 6.3.1.2) from Exiguobacterium sp.

28% id,
94% cov

GLNA1_METMA / Q8PY99: Glutamine synthetase; GS; Glutamate--ammonia ligase; EC 6.3.1.2 from Methanosarcina mazei
Q8PY99: glutamine synthetase (EC 6.3.1.2) from Methanosarcina mazei

27% id,
94% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 9 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory