Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)

Found 3 curated entries in PaperBLAST's database that match 'Glutamate--LysW ligase' as complete word(s).

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query

Pf1N1B4_1774: Ribosomal protein S6 glutaminyl transferase
is similar to:
PaperBLAST

ARGX_SULTO / Q970U6: Glutamate--LysW ligase ArgX; EC 6.3.2.- from Sulfurisphaera tokodaii

32% id,
85% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory