Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)
Found 2 curated entries in PaperBLAST's database that match 'acetohydroxy acid synthase%large' as complete word(s).
These curated entries have 2 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query
Pf1N1B4_2878: Acetolactate synthase large subunit (EC 2.2.1.6) is similar to: | PaperBLAST |
ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus | 47% id, 95% cov |
ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis | 46% id, 92% cov |
Pf1N1B4_3661: Glyoxylate carboligase (EC 4.1.1.47) is similar to: | PaperBLAST |
ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus | 35% id, 91% cov |
ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis | 34% id, 90% cov |
Pf1N1B4_696: Acetolactate synthase, large subunit (EC 2.2.1.6) is similar to: | PaperBLAST |
ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus | 31% id, 92% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
4066553-4068382 (frame -2) on unitig_2|quiver.unitig_0|quiver.unitig_1|quiver|pilon is similar to: | PaperBLAST |
ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus | 35% id, 92% cov |
Lawrence Berkeley National Laboratory