Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)

Found 4 curated entries in PaperBLAST's database that match 'anthranilate synthase beta subunit' as complete word(s).

These curated entries have 4 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query

Pf1N1B4_2547: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)
is similar to:
PaperBLAST

PHNB_PSEAE / P09786: Anthranilate synthase component 2, pyocyanine specific; AS; ASII; Anthranilate synthase beta subunit, pyocyanine specific; Anthranilate synthase, GATase component; Anthranilate synthase, glutamine amidotransferase component; EC 4.1.3.27 from Pseudomonas aeruginosa

44% id,
95% cov

ASB1_ARATH / Q42565: Anthranilate synthase beta subunit 1, chloroplastic; Anthranilate synthase component 2-1; Anthranilate synthase, glutamine amidotransferase component 2-1; Protein TRYPTOPHAN BIOSYNTHESIS 4; Protein WEAK ETHYLENE INSENSITIVE 7; EC 4.1.3.27 from Arabidopsis thaliana

51% id,
69% cov

ASB2_ORYSJ / Q764B9: Anthranilate synthase beta subunit 2, chloroplastic; OsASB2; Anthranilate synthase, glutamine amidotransferase component 2-2; EC 4.1.3.27 from Oryza sativa

48% id,
71% cov

More...

Pf1N1B4_1173: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
is similar to:
PaperBLAST

PHNB_PSEAE / P09786: Anthranilate synthase component 2, pyocyanine specific; AS; ASII; Anthranilate synthase beta subunit, pyocyanine specific; Anthranilate synthase, GATase component; Anthranilate synthase, glutamine amidotransferase component; EC 4.1.3.27 from Pseudomonas aeruginosa

28% id,
79% cov

Pf1N1B4_839: GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)
is similar to:
PaperBLAST

ASB1_ORYSJ / Q7XUS2: Anthranilate synthase beta subunit 1, chloroplastic; OsASB1; Anthranilate synthase, glutamine amidotransferase component 2-1; EC 4.1.3.27 from Oryza sativa

27% id,
66% cov

Pf1N1B4_1477: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
is similar to:
PaperBLAST

ASB1_ORYSJ / Q7XUS2: Anthranilate synthase beta subunit 1, chloroplastic; OsASB1; Anthranilate synthase, glutamine amidotransferase component 2-1; EC 4.1.3.27 from Oryza sativa

44% id,
16% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory