Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)

Found 9 curated entries in PaperBLAST's database that match 'anthranilate synthase component 2' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query

Pf1N1B4_2547: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)
is similar to:
PaperBLAST

TRPG_PSEPU / P00901: Anthranilate synthase component 2; AS; ASII; Anthranilate synthase, GATase component; Anthranilate synthase, glutamine amidotransferase component; EC 4.1.3.27 from Pseudomonas putida

90% id,
99% cov

TRPG_PSEAE / P20576: Anthranilate synthase component 2; AS; ASII; Anthranilate synthase, GATase component; Anthranilate synthase, glutamine amidotransferase component; EC 4.1.3.27 from Pseudomonas aeruginosa

80% id,
98% cov

PABA_BACSU / P28819: Aminodeoxychorismate/anthranilate synthase component 2; ADC synthase; ADCS; 4-amino-4-deoxychorismate synthase component 2; Aminodeoxychorismate synthase, glutamine amidotransferase component; EC 2.6.1.85; EC 4.1.3.27 from Bacillus subtilis

67% id,
96% cov

More...

Pf1N1B4_1173: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
is similar to:
PaperBLAST

TRPG_SACS2 / Q06129: Anthranilate synthase component 2; AS; ASII; Anthranilate synthase, GATase component; Anthranilate synthase, glutamine amidotransferase component; EC 4.1.3.27 from Saccharolobus solfataricus

28% id,
95% cov

TRPG_PSEPU / P00901: Anthranilate synthase component 2; AS; ASII; Anthranilate synthase, GATase component; Anthranilate synthase, glutamine amidotransferase component; EC 4.1.3.27 from Pseudomonas putida

27% id,
96% cov

TRPG_AZOBR / P26922: Anthranilate synthase component 2; AS; ASII; Anthranilate synthase, GATase component; Anthranilate synthase, glutamine amidotransferase component; EC 4.1.3.27 from Azospirillum brasilense

26% id,
92% cov

More...

Pf1N1B4_4353: Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94)
is similar to:
PaperBLAST

TRPG_AZOBR / P26922: Anthranilate synthase component 2; AS; ASII; Anthranilate synthase, GATase component; Anthranilate synthase, glutamine amidotransferase component; EC 4.1.3.27 from Azospirillum brasilense

30% id,
80% cov

Pf1N1B4_2255: Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94)
is similar to:
PaperBLAST

TRPG_AZOBR / P26922: Anthranilate synthase component 2; AS; ASII; Anthranilate synthase, GATase component; Anthranilate synthase, glutamine amidotransferase component; EC 4.1.3.27 from Azospirillum brasilense

32% id,
65% cov

Pf1N1B4_2549: Indole-3-glycerol phosphate synthase (EC 4.1.1.48)
is similar to:
PaperBLAST

trpC: anthranilate synthase component 2; EC 4.1.3.27 from Emericella nidulans

40% id,
30% cov

Pf1N1B4_6: Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
is similar to:
PaperBLAST

trpC: anthranilate synthase component 2; EC 4.1.3.27 from Emericella nidulans

39% id,
8% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory