Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)
Found 2 curated entries in PaperBLAST's database that match 'carbamoyl-phosphate synthetase%large' as complete word(s).
These curated entries have 2 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query
| Pf1N1B4_1172: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) is similar to: | PaperBLAST |
carB / P00968: carbamoyl-phosphate synthetase large subunit (EC 6.3.5.5) from Escherichia coli | 75% id, 100% cov |
pyrAB / P25994: pyrimidine-specific carbamoyl-phosphate synthetase (large subunit) (EC 6.3.5.5) from Bacillus subtilis | 50% id, 98% cov |
| Pf1N1B4_1309: Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) is similar to: | PaperBLAST |
pyrAB / P25994: pyrimidine-specific carbamoyl-phosphate synthetase (large subunit) (EC 6.3.5.5) from Bacillus subtilis | 23% id, 29% cov |
| Pf1N1B4_2010: Pyruvate carboxyl transferase subunit A (EC 6.4.1.1) is similar to: | PaperBLAST |
pyrAB / P25994: pyrimidine-specific carbamoyl-phosphate synthetase (large subunit) (EC 6.3.5.5) from Bacillus subtilis | 26% id, 21% cov |
| Pf1N1B4_941: D-alanine--D-alanine ligase (EC 6.3.2.4) is similar to: | PaperBLAST |
pyrAB / P25994: pyrimidine-specific carbamoyl-phosphate synthetase (large subunit) (EC 6.3.5.5) from Bacillus subtilis | 23% id, 23% cov |
carB / P00968: carbamoyl-phosphate synthetase large subunit (EC 6.3.5.5) from Escherichia coli | 21% id, 24% cov |
| Pf1N1B4_879: Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) is similar to: | PaperBLAST |
carB / P00968: carbamoyl-phosphate synthetase large subunit (EC 6.3.5.5) from Escherichia coli | 25% id, 16% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory