Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)

Found 28 curated entries in PaperBLAST's database that match 'cystathionine gamma-lyase' as complete word(s).

These curated entries have 25 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query

Pf1N1B4_4890: Cystathionine gamma-lyase (EC 4.4.1.1) is similar to:	PaperBLAST
7ba4A / A0A509J8D5: Structure of cystathionine gamma-lyase from pseudomonas aeruginosa	83% id, 99% cov
6k1lA / B4SII9: E53a mutant of a putative cystathionine gamma-lyase	68% id, 99% cov
Q5H4T8: cystathionine gamma-lyase (EC 4.4.1.1) from Xanthomonas oryzae	67% id, 98% cov
A2RM21: cystathionine gamma-lyase (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lactococcus lactis	54% id, 98% cov
metB / P56069: cystathionine gamma-lyase (EC 4.4.1.1) from Helicobacter pylori	53% id, 99% cov
CGL_DICDI / Q55DV9: Cystathionine gamma-lyase; CGL; CSE; Cysteine desulfhydrase; Cysteine-protein sulfhydrase; Gamma-cystathionase; Homocysteine desulfhydrase; EC 4.4.1.1; EC 4.4.1.2 from Dictyostelium discoideum	54% id, 97% cov
MCCB_BACSU / O05394: Cystathionine gamma-lyase; Gamma-cystathionase; Homocysteine gamma-lyase; EC 4.4.1.1; EC 4.4.1.2 from Bacillus subtilis	51% id, 99% cov
B3TNN8: cystathionine gamma-lyase (subunit 2/2) (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lacticaseibacillus casei	52% id, 95% cov
8j6nA / Q9EQS4: Crystal structure of cystathionine gamma-lyase in complex with compound 1	52% id, 97% cov
B3TNN9: cystathionine gamma-lyase (subunit 1/2) (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lacticaseibacillus casei	52% id, 95% cov
7d7oB / Q818A3: Crystal structure of cystathionine gamma-lyase from bacillus cereus atcc 14579	50% id, 99% cov
6ldoA / F9UT53: Crystal structure of cystathionine gamma-lyase from lactobacillus plantarum complexed with l-serine	50% id, 99% cov
CGL_MOUSE / Q8VCN5: Cystathionine gamma-lyase; CGL; CSE; Cysteine desulfhydrase; Cysteine-protein sulfhydrase; Gamma-cystathionase; Homocysteine desulfhydrase; EC 4.4.1.1; EC 4.4.1.2 from Mus musculus	52% id, 95% cov
CGL_RAT / P18757: Cystathionine gamma-lyase; CGL; CSE; Cysteine desulfhydrase; Cysteine-protein sulfhydrase; Gamma-cystathionase; Homocysteine desulfhydrase; Probasin-related antigen; PRB-RA; EC 4.4.1.1; EC 4.4.1.2 from Rattus norvegicus	51% id, 95% cov
CGL_HUMAN / P32929: Cystathionine gamma-lyase; CGL; CSE; Cysteine desulfhydrase; Cysteine-protein sulfhydrase; Gamma-cystathionase; Homocysteine desulfhydrase; EC 4.4.1.1; EC 4.4.1.2 from Homo sapiens P32929: cystathionine gamma-lyase (EC 4.4.1.1) from Homo sapiens	52% id, 93% cov
Q4WCI1: cystathionine gamma-lyase (EC 4.4.1.1) from Aspergillus fumigatus	48% id, 95% cov
Q96VU7: cystathionine gamma-lyase (EC 4.4.1.1) from Neurospora crassa	48% id, 95% cov
1n8pA / P31373: Crystal structure of cystathionine gamma-lyase from yeast	47% id, 97% cov
CYS3_YEAST / P31373: Cystathionine gamma-lyase; gamma-CTLase; Gamma-cystathionase; Sulfur transfer protein 1; EC 4.4.1.1 from Saccharomyces cerevisiae P31373: cystathionine gamma-lyase (EC 4.4.1.1) from Saccharomyces cerevisiae	47% id, 97% cov
mecB: cystathionine gamma-lyase; EC 4.4.1.1 from Emericella nidulans B2LXT6: cystathionine gamma-lyase (EC 4.4.1.1) from Aspergillus nidulans	49% id, 93% cov
E9AFE7: cystathionine gamma-lyase (EC 4.4.1.1) from Leishmania major	42% id, 94% cov
7nl1D / A0A125YN40: Crystal structure of cystathionine gamma-lyase from toxoplasma gondii	41% id, 97% cov
B6K8Y1: cystathionine gamma-lyase (EC 4.4.1.1) from Toxoplasma gondii	41% id, 93% cov
More...

Pf1N1B4_3374: Cysteine synthase (EC 2.5.1.47) is similar to:	PaperBLAST
CGL_ARATH / F4K5T2: Bifunctional cystathionine gamma-lyase/cysteine synthase; Beta-substituted Ala synthase 4;3; ARAth-Bsas4;3; L-cysteine desulfhydrase 1; DES1; O-acetylserine (thiol)-lyase; OASTL; Protein CS-LIKE; EC 2.5.1.47; EC 4.4.1.1 from Arabidopsis thaliana	51% id, 97% cov

Pf1N1B4_4430: Cystathionine beta-lyase (EC 4.4.1.8) is similar to:	PaperBLAST
metB / P56069: cystathionine gamma-lyase (EC 4.4.1.1) from Helicobacter pylori	37% id, 99% cov
7ba4A / A0A509J8D5: Structure of cystathionine gamma-lyase from pseudomonas aeruginosa	39% id, 88% cov
6k1lA / B4SII9: E53a mutant of a putative cystathionine gamma-lyase	34% id, 99% cov
7d7oB / Q818A3: Crystal structure of cystathionine gamma-lyase from bacillus cereus atcc 14579	33% id, 100% cov
A2RM21: cystathionine gamma-lyase (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lactococcus lactis	34% id, 98% cov
Q5H4T8: cystathionine gamma-lyase (EC 4.4.1.1) from Xanthomonas oryzae	34% id, 96% cov
8j6nA / Q9EQS4: Crystal structure of cystathionine gamma-lyase in complex with compound 1	34% id, 97% cov
MCCB_BACSU / O05394: Cystathionine gamma-lyase; Gamma-cystathionase; Homocysteine gamma-lyase; EC 4.4.1.1; EC 4.4.1.2 from Bacillus subtilis	34% id, 97% cov
CGL_MOUSE / Q8VCN5: Cystathionine gamma-lyase; CGL; CSE; Cysteine desulfhydrase; Cysteine-protein sulfhydrase; Gamma-cystathionase; Homocysteine desulfhydrase; EC 4.4.1.1; EC 4.4.1.2 from Mus musculus	34% id, 95% cov
CGL_RAT / P18757: Cystathionine gamma-lyase; CGL; CSE; Cysteine desulfhydrase; Cysteine-protein sulfhydrase; Gamma-cystathionase; Homocysteine desulfhydrase; Probasin-related antigen; PRB-RA; EC 4.4.1.1; EC 4.4.1.2 from Rattus norvegicus	34% id, 95% cov
CGL_HUMAN / P32929: Cystathionine gamma-lyase; CGL; CSE; Cysteine desulfhydrase; Cysteine-protein sulfhydrase; Gamma-cystathionase; Homocysteine desulfhydrase; EC 4.4.1.1; EC 4.4.1.2 from Homo sapiens P32929: cystathionine gamma-lyase (EC 4.4.1.1) from Homo sapiens	34% id, 93% cov
CGL_DICDI / Q55DV9: Cystathionine gamma-lyase; CGL; CSE; Cysteine desulfhydrase; Cysteine-protein sulfhydrase; Gamma-cystathionase; Homocysteine desulfhydrase; EC 4.4.1.1; EC 4.4.1.2 from Dictyostelium discoideum	32% id, 97% cov
6ldoA / F9UT53: Crystal structure of cystathionine gamma-lyase from lactobacillus plantarum complexed with l-serine	31% id, 99% cov
B3TNN9: cystathionine gamma-lyase (subunit 1/2) (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lacticaseibacillus casei	32% id, 94% cov
B3TNN8: cystathionine gamma-lyase (subunit 2/2) (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lacticaseibacillus casei	31% id, 94% cov
Q4WCI1: cystathionine gamma-lyase (EC 4.4.1.1) from Aspergillus fumigatus	30% id, 96% cov
mecB: cystathionine gamma-lyase; EC 4.4.1.1 from Emericella nidulans B2LXT6: cystathionine gamma-lyase (EC 4.4.1.1) from Aspergillus nidulans	29% id, 95% cov
1n8pA / P31373: Crystal structure of cystathionine gamma-lyase from yeast	30% id, 88% cov
Q96VU7: cystathionine gamma-lyase (EC 4.4.1.1) from Neurospora crassa	33% id, 82% cov
CYS3_YEAST / P31373: Cystathionine gamma-lyase; gamma-CTLase; Gamma-cystathionase; Sulfur transfer protein 1; EC 4.4.1.1 from Saccharomyces cerevisiae P31373: cystathionine gamma-lyase (EC 4.4.1.1) from Saccharomyces cerevisiae	30% id, 88% cov
7nl1D / A0A125YN40: Crystal structure of cystathionine gamma-lyase from toxoplasma gondii	29% id, 86% cov
B6K8Y1: cystathionine gamma-lyase (EC 4.4.1.1) from Toxoplasma gondii	29% id, 82% cov
More...

Pf1N1B4_3506: Cysteine synthase B (EC 2.5.1.47) is similar to:	PaperBLAST
CGL_ARATH / F4K5T2: Bifunctional cystathionine gamma-lyase/cysteine synthase; Beta-substituted Ala synthase 4;3; ARAth-Bsas4;3; L-cysteine desulfhydrase 1; DES1; O-acetylserine (thiol)-lyase; OASTL; Protein CS-LIKE; EC 2.5.1.47; EC 4.4.1.1 from Arabidopsis thaliana	39% id, 93% cov

Pf1N1B4_4889: Cystathionine beta-synthase (EC 4.2.1.22) is similar to:	PaperBLAST
CGL_ARATH / F4K5T2: Bifunctional cystathionine gamma-lyase/cysteine synthase; Beta-substituted Ala synthase 4;3; ARAth-Bsas4;3; L-cysteine desulfhydrase 1; DES1; O-acetylserine (thiol)-lyase; OASTL; Protein CS-LIKE; EC 2.5.1.47; EC 4.4.1.1 from Arabidopsis thaliana	39% id, 92% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory