Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)
Found 1 curated entries in PaperBLAST's database that match 'glutamyl-tRNA(Gln) amidotransferase subunit D' as complete word(s).
These curated entries have 1 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query
| Pf1N1B4_2023: L-asparaginase (EC 3.5.1.1) is similar to: | PaperBLAST |
gatD / O26802: glutamyl-tRNA(Gln) amidotransferase subunit D (EC 6.3.5.7) from Methanothermobacter thermautotrophicus | 29% id, 78% cov |
| Pf1N1B4_6037: L-asparaginase (EC 3.5.1.1) is similar to: | PaperBLAST |
gatD / O26802: glutamyl-tRNA(Gln) amidotransferase subunit D (EC 6.3.5.7) from Methanothermobacter thermautotrophicus | 27% id, 78% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 2308651-2309754 (frame -3) on unitig_2|quiver.unitig_0|quiver.unitig_1|quiver|pilon is similar to: | PaperBLAST |
gatD / O26802: glutamyl-tRNA(Gln) amidotransferase subunit D (EC 6.3.5.7) from Methanothermobacter thermautotrophicus | 29% id, 81% cov |
Lawrence Berkeley National Laboratory