Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)

Found 5 curated entries in PaperBLAST's database that match 'glutamylputrescine oxidase' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query

Pf1N1B4_6047: Nucleoside-diphosphate-sugar epimerases
is similar to:
PaperBLAST

Pf6N2E2_80: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

95% id,
100% cov

AO356_21495: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

95% id,
100% cov

PUUB_ECOLI / P37906: Gamma-glutamylputrescine oxidoreductase; Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase; EC 1.4.3.- from Escherichia coli
YcjA / b1301: γ-glutamylputrescine oxidase from Escherichia coli
puuB / P37906: γ-glutamylputrescine oxidase from Escherichia coli

65% id,
100% cov

Pf1N1B4_4356: Gamma-glutamyl-putrescine oxidase (EC1.4.3.-)
is similar to:
PaperBLAST

PUUB_ECOLI / P37906: Gamma-glutamylputrescine oxidoreductase; Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase; EC 1.4.3.- from Escherichia coli
YcjA / b1301: γ-glutamylputrescine oxidase from Escherichia coli
puuB / P37906: γ-glutamylputrescine oxidase from Escherichia coli

69% id,
100% cov

Pf6N2E2_80: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

65% id,
100% cov

AO356_21495: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

63% id,
99% cov

Pf1N1B4_2141: Gamma-glutamyl-putrescine oxidase (EC1.4.3.-)
is similar to:
PaperBLAST

Pf6N2E2_80: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

47% id,
99% cov

AO356_21495: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

47% id,
98% cov

PUUB_ECOLI / P37906: Gamma-glutamylputrescine oxidoreductase; Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase; EC 1.4.3.- from Escherichia coli
YcjA / b1301: γ-glutamylputrescine oxidase from Escherichia coli
puuB / P37906: γ-glutamylputrescine oxidase from Escherichia coli

46% id,
99% cov

Pf1N1B4_4824: Gamma-glutamyl-putrescine oxidase (EC1.4.3.-)
is similar to:
PaperBLAST

PUUB_ECOLI / P37906: Gamma-glutamylputrescine oxidoreductase; Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase; EC 1.4.3.- from Escherichia coli
YcjA / b1301: γ-glutamylputrescine oxidase from Escherichia coli
puuB / P37906: γ-glutamylputrescine oxidase from Escherichia coli

43% id,
100% cov

AO356_21495: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

43% id,
99% cov

Pf6N2E2_80: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

43% id,
100% cov

Pf1N1B4_4922: Opine oxidase subunit B
is similar to:
PaperBLAST

Pf6N2E2_80: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

34% id,
99% cov

AO356_21495: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

33% id,
98% cov

PUUB_ECOLI / P37906: Gamma-glutamylputrescine oxidoreductase; Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase; EC 1.4.3.- from Escherichia coli
YcjA / b1301: γ-glutamylputrescine oxidase from Escherichia coli
puuB / P37906: γ-glutamylputrescine oxidase from Escherichia coli

34% id,
93% cov

Pf1N1B4_4893: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49)
is similar to:
PaperBLAST

AO356_21495: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

32% id,
94% cov

PUUB_ECOLI / P37906: Gamma-glutamylputrescine oxidoreductase; Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase; EC 1.4.3.- from Escherichia coli
YcjA / b1301: γ-glutamylputrescine oxidase from Escherichia coli
puuB / P37906: γ-glutamylputrescine oxidase from Escherichia coli

29% id,
85% cov

Pf1N1B4_1383: L-pipecolate oxidase (1.5.3.7)
is similar to:
PaperBLAST

PUUB_ECOLI / P37906: Gamma-glutamylputrescine oxidoreductase; Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase; EC 1.4.3.- from Escherichia coli
YcjA / b1301: γ-glutamylputrescine oxidase from Escherichia coli
puuB / P37906: γ-glutamylputrescine oxidase from Escherichia coli

33% id,
90% cov

Pf6N2E2_80: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

32% id,
89% cov

AO356_21495: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

33% id,
86% cov

Pf1N1B4_3963: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49)
is similar to:
PaperBLAST

PUUB_ECOLI / P37906: Gamma-glutamylputrescine oxidoreductase; Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase; EC 1.4.3.- from Escherichia coli
YcjA / b1301: γ-glutamylputrescine oxidase from Escherichia coli
puuB / P37906: γ-glutamylputrescine oxidase from Escherichia coli

29% id,
88% cov

AO356_21495: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

27% id,
88% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory