Curated BLAST for Genomes


Curated BLAST

Searching in Pseudomonas fluorescens FW300-N1B4 (pseudo1_N1B4)

Found 25 curated entries in PaperBLAST's database that match 'sucrose hydrolase' as complete word(s).

These curated entries have 25 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Pseudomonas fluorescens FW300-N1B4, or try another query

Pf1N1B4_5116: Sucrose-6-phosphate hydrolase (EC 3.2.1.B3)
is similar to:

AAP79503.1: sucrose hydrolase (CscA) (EC

46% id,
96% cov

scrB / Q9ZHJ7: sucrose hydrolase from Clostridium beijerinckii

32% id,
94% cov

INV6_ORYSJ / Q56UD0: Beta-fructofuranosidase, insoluble isoenzyme 6; Cell wall beta-fructosidase 6; Invertase 6; OsCIN6; Sucrose hydrolase 6; EC from Oryza sativa

32% id,
63% cov


Pf1N1B4_835: Trehalose-6-phosphate hydrolase (EC
is similar to:

6lgaA / A0A077JI83: Bombyx mori gh13 sucrose hydrolase

35% id,
83% cov

Pf1N1B4_4677: Trehalose synthase (EC
is similar to:

AAM42629.1: sucrose hydrolase (SuxB;XCC3359) (EC 3.2.1.-)

32% id,
51% cov

3czkA / Q6UVM5: Crystal structure analysis of sucrose hydrolase(suh) e322q-sucrose complex

31% id,
50% cov

AAM38333.1: sucrose hydrolase (XAC3490) (EC 3.2.1.-)

32% id,
48% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory