Curated BLAST for Genomes


Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E3 (pseudo3_N2E3)

Found 24 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 19 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Pseudomonas fluorescens FW300-N2E3, or try another query

AO353_25900: mannitol dehydrogenase
is similar to:

A0A0U4Y4V3: mannitol-1-phosphate 5-dehydrogenase (EC from Corynebacterium glutamicum

22% id,
93% cov

C7FDI4: mannitol-1-phosphate 5-dehydrogenase (EC from Beauveria bassiana

25% id,
68% cov

A8YYC5: mannitol-1-phosphate 5-dehydrogenase (EC from Staphylococcus aureus

26% id,
58% cov


AO353_00950: HAD family hydrolase
is similar to:

D0C7J2: mannitol-1-phosphate 5-dehydrogenase (EC; mannitol-1-phosphatase (EC from Acinetobacter baumannii

28% id,
32% cov

Q6FBP5: mannitol-1-phosphate 5-dehydrogenase (EC; mannitol-1-phosphatase (EC from Acinetobacter baylyi

29% id,
27% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory