Searching in Pseudomonas fluorescens FW300-N2E3 (pseudo3_N2E3)
Found 14 curated entries in PaperBLAST's database that match '1.1.1.179' as complete word(s).
These curated entries have 11 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Pseudomonas fluorescens FW300-N2E3, or try another query
AO353_06215: oxidoreductase is similar to: | PaperBLAST |
DHDH_CANLF / Q9TV68: Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase; Can2DD; D-xylose 1-dehydrogenase; D-xylose-NADP dehydrogenase; Dimeric dihydrodiol dehydrogenase; EC 1.3.1.20; EC 1.1.1.179 from Canis lupus | 25% id, 96% cov |
DHDH_RABIT / Q9TV70: Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase; D-xylose 1-dehydrogenase; D-xylose-NADP dehydrogenase; Dimeric dihydrodiol dehydrogenase; Ory2DD; EC 1.3.1.20; EC 1.1.1.179 from Oryctolagus cuniculus | 24% id, 97% cov |
DHDH_PIG / Q9TV69: Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase; D-xylose 1-dehydrogenase; D-xylose-NADP dehydrogenase; Dimeric dihydrodiol dehydrogenase; Sus2DD; EC 1.3.1.20; EC 1.1.1.179 from Sus scrofa | 24% id, 96% cov |
AO353_21490: 1-carboxy-3-chloro-3,4-dihydroxycyclo hexa-1,5-diene dehydrogenase is similar to: | PaperBLAST |
XDH_PAENI / Q8GAK6: D-xylose dehydrogenase; NADP-dependent D-xylose dehydrogenase; EC 1.1.1.179 from Paenarthrobacter nicotinovorans | 28% id, 71% cov |
D4GP29: D-xylose 1-dehydrogenase (NADP+, D-xylono-1,5-lactone-forming) (EC 1.1.1.179); D-xylose 1-dehydrogenase (NADP+, D-xylono-1,4-lactone-forming) (EC 1.1.1.424) from Haloferax volcanii | 28% id, 68% cov |
Q5UY95: D-xylose 1-dehydrogenase (NADP+, D-xylono-1,5-lactone-forming) (EC 1.1.1.179); D-xylose 1-dehydrogenase (NADP+, D-xylono-1,4-lactone-forming) (EC 1.1.1.424) from Haloarcula marismortui | 27% id, 53% cov |
AO353_23200: oxidoreductase is similar to: | PaperBLAST |
XDH2_HALVD / D4GP30: D-xylose 1-dehydrogenase (NADP(+)) 2; XDH 2; EC 1.1.1.179 from Haloferax volcanii | 28% id, 62% cov |
AO353_21375: oxidoreductase is similar to: | PaperBLAST |
D4GP29: D-xylose 1-dehydrogenase (NADP+, D-xylono-1,5-lactone-forming) (EC 1.1.1.179); D-xylose 1-dehydrogenase (NADP+, D-xylono-1,4-lactone-forming) (EC 1.1.1.424) from Haloferax volcanii | 24% id, 67% cov |
AO353_21365: inositol 2-dehydrogenase is similar to: | PaperBLAST |
XDH2_HALVD / D4GP30: D-xylose 1-dehydrogenase (NADP(+)) 2; XDH 2; EC 1.1.1.179 from Haloferax volcanii | 22% id, 50% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
4702777-4703964 (frame -3) on CP012830 is similar to: | PaperBLAST |
XDH_PAENI / Q8GAK6: D-xylose dehydrogenase; NADP-dependent D-xylose dehydrogenase; EC 1.1.1.179 from Paenarthrobacter nicotinovorans | 28% id, 74% cov |
D4GP29: D-xylose 1-dehydrogenase (NADP+, D-xylono-1,5-lactone-forming) (EC 1.1.1.179); D-xylose 1-dehydrogenase (NADP+, D-xylono-1,4-lactone-forming) (EC 1.1.1.424) from Haloferax volcanii | 27% id, 70% cov |
XDH_HYPJR / A0A024SMV2: D-xylose 1-dehydrogenase (NADP(+)); XDH; D-xylose-NADP dehydrogenase; NADP(+)-dependent D-xylose dehydrogenase; EC 1.1.1.179 from Hypocrea jecorina | 26% id, 36% cov |
4679517-4680707 (frame +3) on CP012830 is similar to: | PaperBLAST |
D4GP29: D-xylose 1-dehydrogenase (NADP+, D-xylono-1,5-lactone-forming) (EC 1.1.1.179); D-xylose 1-dehydrogenase (NADP+, D-xylono-1,4-lactone-forming) (EC 1.1.1.424) from Haloferax volcanii | 23% id, 72% cov |
Lawrence Berkeley National Laboratory