Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E3 (pseudo3_N2E3)

Found 8 curated entries in PaperBLAST's database that match '1.1.1.401' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 29 relevant proteins in Pseudomonas fluorescens FW300-N2E3, or try another query

AO353_20700: oxidoreductase
is similar to:
PaperBLAST

C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp.

34% id,
96% cov

KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp.
Ira5 / Q1NEI6: L-2-keto-3-deoxyrhamnonate 4-dehydrogenase subunit (EC 1.1.1.401) from Sphingomonas sp.
Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Sphingomonas sp.

32% id,
99% cov

AO353_24355: sugar dehydrogenase
is similar to:
PaperBLAST

C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp.

33% id,
98% cov

AO353_25145: butanediol dehydrogenase
is similar to:
PaperBLAST

E1QSX6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Vulcanisaeta distributa

32% id,
100% cov

KDRDH_SULTA / P0DOW0: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; EC 1.1.1.401 from Sulfobacillus thermosulfidooxidans
P0DOW0: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Sulfobacillus thermosulfidooxidans

29% id,
99% cov

D4GPB2: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Haloferax volcanii

31% id,
83% cov

AO353_21770: 3-hydroxybutyrate dehydrogenase
is similar to:
PaperBLAST

KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp.
Ira5 / Q1NEI6: L-2-keto-3-deoxyrhamnonate 4-dehydrogenase subunit (EC 1.1.1.401) from Sphingomonas sp.
Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Sphingomonas sp.

34% id,
95% cov

C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp.

33% id,
96% cov

AO353_01660: short-chain dehydrogenase
is similar to:
PaperBLAST

C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp.

32% id,
98% cov

AO353_24520: short-chain dehydrogenase
is similar to:
PaperBLAST

C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp.

32% id,
96% cov

KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp.
Ira5 / Q1NEI6: L-2-keto-3-deoxyrhamnonate 4-dehydrogenase subunit (EC 1.1.1.401) from Sphingomonas sp.
Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Sphingomonas sp.

32% id,
95% cov

AO353_04045: 3-ketoacyl-ACP reductase
is similar to:
PaperBLAST

KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp.
Ira5 / Q1NEI6: L-2-keto-3-deoxyrhamnonate 4-dehydrogenase subunit (EC 1.1.1.401) from Sphingomonas sp.
Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Sphingomonas sp.

32% id,
96% cov

C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp.

31% id,
94% cov

AO353_28590: oxidoreductase
is similar to:
PaperBLAST

KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp.
Ira5 / Q1NEI6: L-2-keto-3-deoxyrhamnonate 4-dehydrogenase subunit (EC 1.1.1.401) from Sphingomonas sp.
Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Sphingomonas sp.

31% id,
97% cov

C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp.

27% id,
96% cov

AO353_12610: 3-ketoacyl-ACP reductase
is similar to:
PaperBLAST

KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp.
Ira5 / Q1NEI6: L-2-keto-3-deoxyrhamnonate 4-dehydrogenase subunit (EC 1.1.1.401) from Sphingomonas sp.
Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Sphingomonas sp.

32% id,
94% cov

AO353_25690: 3-hydroxy-2-methylbutyryl-CoA dehydrogenase
is similar to:
PaperBLAST

C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp.

31% id,
97% cov

KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp.
Ira5 / Q1NEI6: L-2-keto-3-deoxyrhamnonate 4-dehydrogenase subunit (EC 1.1.1.401) from Sphingomonas sp.
Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Sphingomonas sp.

35% id,
85% cov

AO353_01060: 3-ketoacyl-ACP reductase
is similar to:
PaperBLAST

C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp.

33% id,
91% cov

KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp.
Ira5 / Q1NEI6: L-2-keto-3-deoxyrhamnonate 4-dehydrogenase subunit (EC 1.1.1.401) from Sphingomonas sp.
Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Sphingomonas sp.

33% id,
91% cov

AO353_23170: short-chain dehydrogenase
is similar to:
PaperBLAST

C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp.

29% id,
96% cov

AO353_00945: oxidoreductase
is similar to:
PaperBLAST

KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp.
Ira5 / Q1NEI6: L-2-keto-3-deoxyrhamnonate 4-dehydrogenase subunit (EC 1.1.1.401) from Sphingomonas sp.
Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Sphingomonas sp.

30% id,
95% cov

AO353_13875: 3-ketoacyl-ACP reductase
is similar to:
PaperBLAST

C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp.

30% id,
95% cov

KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp.
Ira5 / Q1NEI6: L-2-keto-3-deoxyrhamnonate 4-dehydrogenase subunit (EC 1.1.1.401) from Sphingomonas sp.
Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Sphingomonas sp.

30% id,
89% cov

AO353_01365: 3-ketoacyl-ACP reductase
is similar to:
PaperBLAST

C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp.

29% id,
97% cov

AO353_21495: short-chain dehydrogenase
is similar to:
PaperBLAST

KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp.
Ira5 / Q1NEI6: L-2-keto-3-deoxyrhamnonate 4-dehydrogenase subunit (EC 1.1.1.401) from Sphingomonas sp.
Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Sphingomonas sp.

29% id,
95% cov

C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp.

28% id,
97% cov

AO353_22915: oxidoreductase
is similar to:
PaperBLAST

KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp.
Ira5 / Q1NEI6: L-2-keto-3-deoxyrhamnonate 4-dehydrogenase subunit (EC 1.1.1.401) from Sphingomonas sp.
Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Sphingomonas sp.

29% id,
95% cov

AO353_23150: short-chain dehydrogenase
is similar to:
PaperBLAST

KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp.
Ira5 / Q1NEI6: L-2-keto-3-deoxyrhamnonate 4-dehydrogenase subunit (EC 1.1.1.401) from Sphingomonas sp.
Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Sphingomonas sp.

29% id,
94% cov

C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp.

26% id,
100% cov

AO353_23550: 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase
is similar to:
PaperBLAST

C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp.

27% id,
98% cov

AO353_11955: 3-oxoacyl-ACP reductase
is similar to:
PaperBLAST

C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp.

28% id,
95% cov

KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp.
Ira5 / Q1NEI6: L-2-keto-3-deoxyrhamnonate 4-dehydrogenase subunit (EC 1.1.1.401) from Sphingomonas sp.
Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Sphingomonas sp.

26% id,
96% cov

AO353_03185: short-chain dehydrogenase
is similar to:
PaperBLAST

C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp.

27% id,
95% cov

AO353_07635: aldehyde dismutase
is similar to:
PaperBLAST

KDRDH_SULTA / P0DOW0: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; EC 1.1.1.401 from Sulfobacillus thermosulfidooxidans
P0DOW0: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Sulfobacillus thermosulfidooxidans

30% id,
80% cov

E1QSX6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Vulcanisaeta distributa

32% id,
70% cov

AO353_02185: short-chain dehydrogenase
is similar to:
PaperBLAST

KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp.
Ira5 / Q1NEI6: L-2-keto-3-deoxyrhamnonate 4-dehydrogenase subunit (EC 1.1.1.401) from Sphingomonas sp.
Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Sphingomonas sp.

29% id,
81% cov

C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp.

27% id,
89% cov

AO353_24070: short-chain dehydrogenase
is similar to:
PaperBLAST

C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp.

29% id,
76% cov

AO353_07175: short-chain dehydrogenase
is similar to:
PaperBLAST

C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp.

24% id,
90% cov

AO353_21000: quinone oxidoreductase
is similar to:
PaperBLAST

KDRDH_SULTA / P0DOW0: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; EC 1.1.1.401 from Sulfobacillus thermosulfidooxidans
P0DOW0: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Sulfobacillus thermosulfidooxidans

30% id,
70% cov

AO353_02105: 3-oxoacyl-ACP reductase
is similar to:
PaperBLAST

C785_RS20555 / A0A2E7P978: 2-dehydro-3-deoxy-L-pentonate 4-dehydrogenase (EC 1.1.1.401) from Herbaspirillum sp.

25% id,
77% cov

KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp.
Ira5 / Q1NEI6: L-2-keto-3-deoxyrhamnonate 4-dehydrogenase subunit (EC 1.1.1.401) from Sphingomonas sp.
Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Sphingomonas sp.

24% id,
75% cov

AO353_14815: short-chain dehydrogenase
is similar to:
PaperBLAST

KDRDH_SPHSS / Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD(+)); 2-keto-3-deoxy-L-rhamnonate dehydrogenase; KDRDH; L-KDR dehydrogenase; L-KDR 4-dehydrogenase; EC 1.1.1.401 from Sphingomonas sp.
Ira5 / Q1NEI6: L-2-keto-3-deoxyrhamnonate 4-dehydrogenase subunit (EC 1.1.1.401) from Sphingomonas sp.
Q1NEI6: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Sphingomonas sp.

25% id,
76% cov

AO353_19865: alcohol dehydrogenase
is similar to:
PaperBLAST

D4GPB2: 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) (EC 1.1.1.401) from Haloferax volcanii

37% id,
42% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 27 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory