Curated BLAST for Genomes


Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E3 (pseudo3_N2E3)

Found 29 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 20 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pseudomonas fluorescens FW300-N2E3, or try another query

AO353_05970: tryptophan 2,3-dioxygenase
is similar to:

AO353_05970: Tryptophan 2,3-dioxygenase (EC from Pseudomonas fluorescens

100% id,
100% cov

PfGW456L13_4292: Tryptophan 2,3-dioxygenase (EC from Pseudomonas fluorescens

94% id,
100% cov

PS417_23705: Tryptophan 2,3-dioxygenase (EC from Pseudomonas simiae

89% id,
100% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory