Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E3 (pseudo3_N2E3)

Found 23 curated entries in PaperBLAST's database that match '1.14.16.1' as complete word(s).

These curated entries have 17 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Pseudomonas fluorescens FW300-N2E3, or try another query

AO353_18585: phenylalanine 4-monooxygenase
is similar to:		 PaperBLAST

AO353_18585: Phenylalanine 4-monooxygenase (EC 1.14.16.1) from Pseudomonas fluorescens

 100% id,
100% cov

Pf6N2E2_2630: Phenylalanine 4-monooxygenase (EC 1.14.16.1) from Pseudomonas fluorescens

 95% id,
99% cov

AO356_03975: Phenylalanine 4-monooxygenase (EC 1.14.16.1) from Pseudomonas fluorescens

 95% id,
99% cov

More...

AO353_02070: prephenate dehydratase
is similar to:		 PaperBLAST

PH4H_DICDI / Q54XS1: Phenylalanine-4-hydroxylase; PAH; Phe-4-monooxygenase; Tryptophan 5-hydroxylase; TRH; Tryptophan 5-monooxygenase; EC 1.14.16.1; EC 1.14.16.4 from Dictyostelium discoideum

 32% id,
18% cov

PH4H_CAEEL / P90925: Phenylalanine-4-hydroxylase; PAH; Biogenic amine synthesis protein 2; Phe-4-monooxygenase; Tryptophan 5-monooxygenase; EC 1.14.16.1; EC 1.14.16.4 from Caenorhabditis elegans

 34% id,
16% cov

PH4H_RAT / P04176: Phenylalanine-4-hydroxylase; PAH; Phe-4-monooxygenase; EC 1.14.16.1 from Rattus norvegicus
P04176: phenylalanine 4-monooxygenase (EC 1.14.16.1) from Rattus norvegicus

 34% id,
15% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory