Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E3 (pseudo3_N2E3)

Found 24 curated entries in PaperBLAST's database that match '1.2.1.11' as complete word(s).

These curated entries have 17 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Pseudomonas fluorescens FW300-N2E3, or try another query

AO353_20640: aspartate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

DHAS_PSEAE / Q51344: Aspartate-semialdehyde dehydrogenase; ASA dehydrogenase; ASADH; Aspartate-beta-semialdehyde dehydrogenase; EC 1.2.1.11 from Pseudomonas aeruginosa

90% id,
100% cov

DHAS_ECOLI / P0A9Q9: Aspartate-semialdehyde dehydrogenase; ASA dehydrogenase; ASADH; Aspartate-beta-semialdehyde dehydrogenase; EC 1.2.1.11 from Escherichia coli
Dap / b3433: aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) from Escherichia coli
asd / P0A9Q9: aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) from Escherichia coli

70% id,
100% cov

DHAS1_VIBCH / Q9KQG2: Aspartate-semialdehyde dehydrogenase 1; ASA dehydrogenase 1; ASADH 1; Aspartate-beta-semialdehyde dehydrogenase 1; EC 1.2.1.11 from Vibrio cholerae
asd / Q9KQG2: aspartate-β-semialdehyde dehydrogenase subunit (EC 1.2.1.11) from Vibrio cholerae
Q9KQG2: aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) from Vibrio cholerae

70% id,
99% cov

More...

AO353_20645: aspartate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

DHAS2_VIBCH / P23247: Aspartate-semialdehyde dehydrogenase 2; ASA dehydrogenase 2; ASADH 2; Aspartate-beta-semialdehyde dehydrogenase 2; EC 1.2.1.11 from Vibrio cholerae

41% id,
99% cov

DHAS_MYCTU / P9WNX5: Aspartate-semialdehyde dehydrogenase; ASA dehydrogenase; ASADH; Aspartate-beta-semialdehyde dehydrogenase; EC 1.2.1.11 from Mycobacterium tuberculosis
P9WNX5: aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) from Mycobacterium tuberculosis

36% id,
100% cov

asd / Q04797: aspartate semialdehyde dehydrogenase subunit (EC 1.2.1.11) from Bacillus subtilis

36% id,
99% cov

More...

AO353_07155: N-acetyl-gamma-glutamyl-phosphate reductase
is similar to:
PaperBLAST

DHAS_METJA / Q57658: Aspartate-semialdehyde dehydrogenase; ASA dehydrogenase; ASADH; Aspartate-beta-semialdehyde dehydrogenase; EC 1.2.1.11 from Methanocaldococcus jannaschii
asd / Q57658: aspartate-semialdehyde dehydrogenase monomer (EC 1.2.1.11) from Methanocaldococcus jannaschii

25% id,
51% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory