Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E3 (pseudo3_N2E3)

Found 61 curated entries in PaperBLAST's database that match '1.8.1.4' as complete word(s).

These curated entries have 46 distinct sequences.

Running ublast with E ≤ 0.01

Found 28 relevant proteins in Pseudomonas fluorescens FW300-N2E3, or try another query

AO353_26650: dihydrolipoamide dehydrogenase
is similar to:
PaperBLAST

AO356_22975: Dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas fluorescens

94% id,
100% cov

Pf6N2E2_478: Dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas fluorescens

94% id,
100% cov

PfGW456L13_3543: Dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas fluorescens

93% id,
100% cov

More...

AO353_01825: dihydrolipoamide dehydrogenase
is similar to:
PaperBLAST

lpdG / GI|1256717: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Pseudomonas putida

91% id,
100% cov

DLDH_PSEFL / P14218: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of 2-oxoglutarate dehydrogenase complex; EC 1.8.1.4 from Pseudomonas fluorescens

83% id,
100% cov

Q9I3D1: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas aeruginosa
A0A0H2Z9F5: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas aeruginosa

83% id,
100% cov

More...

AO353_26970: glutathione reductase
is similar to:
PaperBLAST

DLDH_HYMDI / P80647: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Hymenolepis diminuta

51% id,
89% cov

DLDH_THESS / P85207: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Thermus scotoductus

37% id,
95% cov

DLDH_AZOVI / P18925: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of pyruvate complex; EC 1.8.1.4 from Azotobacter vinelandii
GI|142325: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Azotobacter vinelandii

34% id,
98% cov

More...

AO353_24480: glutathione reductase
is similar to:
PaperBLAST

DLDH_HYMDI / P80647: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Hymenolepis diminuta

49% id,
89% cov

DLDH_THESS / P85207: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Thermus scotoductus

36% id,
95% cov

DLDH_PSEFL / P14218: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of 2-oxoglutarate dehydrogenase complex; EC 1.8.1.4 from Pseudomonas fluorescens

34% id,
95% cov

More...

AO353_00390: pyridine nucleotide-disulfide oxidoreductase
is similar to:
PaperBLAST

DLDH_HYMDI / P80647: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Hymenolepis diminuta

45% id,
89% cov

DLDH_MESAU / Q811C4: Dihydrolipoyl dehydrogenase, mitochondrial; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Mesocricetus auratus

33% id,
95% cov

lpdA / O84561: dihydrolipoyl dehydrogenase subunit (EC 1.8.1.4) from Chlamydia trachomatis

32% id,
96% cov

More...

AO353_07650: sarcosine oxidase subunit alpha
is similar to:
PaperBLAST

DLDH_HYMDI / P80647: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Hymenolepis diminuta

35% id,
75% cov

A5N930: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Clostridium kluyveri

24% id,
35% cov

Q8MUB0: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Bombyx mori

32% id,
15% cov

More...

AO353_12860: dihydrolipoamide acetyltransferase
is similar to:
PaperBLAST

pdhL: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Cupriavidus necator
Q0KBV8: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Cupriavidus necator

34% id,
55% cov

lpdA / B3TZD6: dihydrolipoamide dehydrogenase (EC 1.8.1.4) from Advenella kashmirensis

49% id,
22% cov

pdhL: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Cupriavidus necator
Q0KBV8: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Cupriavidus necator

55% id,
18% cov

More...

AO353_26960: alkyl hydroperoxide reductase subunit F
is similar to:
PaperBLAST

A5N930: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Clostridium kluyveri

25% id,
72% cov

LPD1: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Candida albicans

27% id,
67% cov

DLDH_PEA / P31023: Dihydrolipoyl dehydrogenase, mitochondrial; Dihydrolipoamide dehydrogenase; Glycine cleavage system L protein; Pyruvate dehydrogenase complex E3 subunit; E3; PDC-E3; EC 1.8.1.4 from Pisum sativum

27% id,
64% cov

More...

AO353_05015: thioredoxin reductase
is similar to:
PaperBLAST

P50970: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Zymomonas mobilis

26% id,
68% cov

B6F1A8: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Microbacterium luteolum

25% id,
70% cov

lpdA / O84561: dihydrolipoyl dehydrogenase subunit (EC 1.8.1.4) from Chlamydia trachomatis

52% id,
7% cov

AO353_27655: thioredoxin reductase
is similar to:
PaperBLAST

B6F1A8: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Microbacterium luteolum

24% id,
70% cov

P50970: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Zymomonas mobilis

24% id,
29% cov

acoL: TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Clostridium magnum

28% id,
19% cov

More...

AO353_07710: N-methylproline demethylase
is similar to:
PaperBLAST

Q8VPK7: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Streptococcus pneumoniae

25% id,
60% cov

A0A0H2ZHZ0: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas aeruginosa

22% id,
57% cov

DLDH_YEAST / P09624: Dihydrolipoyl dehydrogenase, mitochondrial; DLD; 2-oxoglutarate dehydrogenase complex component E3; OGDC-E3; OGDHC subunit E3; Alpha-ketoglutarate dehydrogenase complex subunit E3; alpha-KGDHC subunit E3; Dihydrolipoamide dehydrogenase; Dihydrolipoamide:NAD(+) oxidoreductase; Glycine decarboxylase complex subunit L; GDC subunit L; Lipoamide dehydrogenase component of pyruvate dehydrogenase complex; Pyruvate dehydrogenase complex E3 component; PDC subunit E3; PDH complex subunit E3; EC 1.8.1.4 from Saccharomyces cerevisiae

22% id,
57% cov

More...

AO353_00805: nitrite reductase
is similar to:
PaperBLAST

acoL: TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Clostridium magnum

27% id,
51% cov

DLDH_CHATD / G0SB20: Dihydrolipoamide dehydrogenase; Lipoamide dehydrogenase component of pyruvate dehydrogenase complex; Pyruvate dehydrogenase complex E3 component; EC 1.8.1.4 from Chaetomium thermophilum

30% id,
38% cov

AO353_26805: (2Fe-2S)-binding protein
is similar to:
PaperBLAST

Q8VPK7: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Streptococcus pneumoniae

24% id,
47% cov

DLDH_YEAST / P09624: Dihydrolipoyl dehydrogenase, mitochondrial; DLD; 2-oxoglutarate dehydrogenase complex component E3; OGDC-E3; OGDHC subunit E3; Alpha-ketoglutarate dehydrogenase complex subunit E3; alpha-KGDHC subunit E3; Dihydrolipoamide dehydrogenase; Dihydrolipoamide:NAD(+) oxidoreductase; Glycine decarboxylase complex subunit L; GDC subunit L; Lipoamide dehydrogenase component of pyruvate dehydrogenase complex; Pyruvate dehydrogenase complex E3 component; PDC subunit E3; PDH complex subunit E3; EC 1.8.1.4 from Saccharomyces cerevisiae

49% id,
7% cov

AO353_03895: 4-hydroxybenzoate 3-monooxygenase
is similar to:
PaperBLAST

DLDH_ECOLI / P0A9P0: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes; Glycine cleavage system L protein; EC 1.8.1.4 from Escherichia coli
Lpd / b0116: lipoamide dehydrogenase (EC 1.8.1.4) from Escherichia coli
lpd / SP|P0A9P1: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Escherichia coli
lpd / P0A9P0: lipoamide dehydrogenase (EC 1.8.1.4) from Escherichia coli
P0A9P0: pyruvate dehydrogenase system (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Escherichia coli

30% id,
34% cov

AO353_24455: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

A5N930: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Clostridium kluyveri

27% id,
32% cov

AO353_19960: branched-chain alpha-keto acid dehydrogenase subunit E2
is similar to:
PaperBLAST

acoL: TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Clostridium magnum

34% id,
24% cov

AO353_26575: dihydropyrimidine dehydrogenase
is similar to:
PaperBLAST

lpdA / B3TZD6: dihydrolipoamide dehydrogenase (EC 1.8.1.4) from Advenella kashmirensis

28% id,
27% cov

AO353_25150: acetoin dehydrogenase
is similar to:
PaperBLAST

acoL: TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Clostridium magnum

27% id,
26% cov

Q8VPK7: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Streptococcus pneumoniae

30% id,
19% cov

AO353_12985: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

AO356_22975: Dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas fluorescens

28% id,
24% cov

AO353_01845: succinate dehydrogenase
is similar to:
PaperBLAST

DLDH_YEAST / P09624: Dihydrolipoyl dehydrogenase, mitochondrial; DLD; 2-oxoglutarate dehydrogenase complex component E3; OGDC-E3; OGDHC subunit E3; Alpha-ketoglutarate dehydrogenase complex subunit E3; alpha-KGDHC subunit E3; Dihydrolipoamide dehydrogenase; Dihydrolipoamide:NAD(+) oxidoreductase; Glycine decarboxylase complex subunit L; GDC subunit L; Lipoamide dehydrogenase component of pyruvate dehydrogenase complex; Pyruvate dehydrogenase complex E3 component; PDC subunit E3; PDH complex subunit E3; EC 1.8.1.4 from Saccharomyces cerevisiae

35% id,
17% cov

AO353_20220: 2,4-dienoyl-CoA reductase
is similar to:
PaperBLAST

DLDH_YEAST / P09624: Dihydrolipoyl dehydrogenase, mitochondrial; DLD; 2-oxoglutarate dehydrogenase complex component E3; OGDC-E3; OGDHC subunit E3; Alpha-ketoglutarate dehydrogenase complex subunit E3; alpha-KGDHC subunit E3; Dihydrolipoamide dehydrogenase; Dihydrolipoamide:NAD(+) oxidoreductase; Glycine decarboxylase complex subunit L; GDC subunit L; Lipoamide dehydrogenase component of pyruvate dehydrogenase complex; Pyruvate dehydrogenase complex E3 component; PDC subunit E3; PDH complex subunit E3; EC 1.8.1.4 from Saccharomyces cerevisiae

25% id,
24% cov

AO353_15585: branched-chain alpha-keto acid dehydrogenase subunit E2
is similar to:
PaperBLAST

lpdA / B3TZD6: dihydrolipoamide dehydrogenase (EC 1.8.1.4) from Advenella kashmirensis

31% id,
18% cov

pdhL: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Cupriavidus necator
Q0KBV8: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Cupriavidus necator

31% id,
15% cov

AO353_14910: pyridine nucleotide-disulfide oxidoreductase
is similar to:
PaperBLAST

Q8VPK7: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Streptococcus pneumoniae

22% id,
25% cov

A5N930: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Clostridium kluyveri

41% id,
11% cov

Q8MUB0: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Bombyx mori

32% id,
11% cov

AO353_24795: oxidoreductase
is similar to:
PaperBLAST

DLDH_YEAST / P09624: Dihydrolipoyl dehydrogenase, mitochondrial; DLD; 2-oxoglutarate dehydrogenase complex component E3; OGDC-E3; OGDHC subunit E3; Alpha-ketoglutarate dehydrogenase complex subunit E3; alpha-KGDHC subunit E3; Dihydrolipoamide dehydrogenase; Dihydrolipoamide:NAD(+) oxidoreductase; Glycine decarboxylase complex subunit L; GDC subunit L; Lipoamide dehydrogenase component of pyruvate dehydrogenase complex; Pyruvate dehydrogenase complex E3 component; PDC subunit E3; PDH complex subunit E3; EC 1.8.1.4 from Saccharomyces cerevisiae

29% id,
19% cov

DLDH_CHATD / G0SB20: Dihydrolipoamide dehydrogenase; Lipoamide dehydrogenase component of pyruvate dehydrogenase complex; Pyruvate dehydrogenase complex E3 component; EC 1.8.1.4 from Chaetomium thermophilum

41% id,
11% cov

AO353_01830: dihydrolipoamide succinyltransferase
is similar to:
PaperBLAST

pdhL: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Cupriavidus necator
Q0KBV8: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Cupriavidus necator

38% id,
12% cov

AO353_05245: rod shape-determining protein MreC
is similar to:
PaperBLAST

pdhL: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Cupriavidus necator
Q0KBV8: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Cupriavidus necator

43% id,
10% cov

AO353_08065: amino acid dehydrogenase
is similar to:
PaperBLAST

LPD1: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Candida albicans

44% id,
8% cov

AO353_06225: FAD-binding dehydrogenase
is similar to:
PaperBLAST

pdhL: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Cupriavidus necator
Q0KBV8: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Cupriavidus necator

31% id,
10% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 21 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2109-3842 (frame +3) on CP012830
is similar to:
PaperBLAST

DLDH1_ARATH / Q9M5K3: Dihydrolipoyl dehydrogenase 1, mitochondrial; AtmLPD1; mtLPD1; Dihydrolipoamide dehydrogenase 1; Glycine cleavage system L protein 1; Pyruvate dehydrogenase complex E3 subunit 1; E3-1; PDC-E3 1; EC 1.8.1.4 from Arabidopsis thaliana
Also see hits to annotated proteins above

31% id,
19% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory