Curated BLAST for Genomes


Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E3 (pseudo3_N2E3)

Found 52 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 34 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Pseudomonas fluorescens FW300-N2E3, or try another query

AO353_14225: laccase
is similar to:

PURNU_ECOLI / P33644: Purine nucleoside phosphorylase YfiH; Adenosine deaminase YfiH; Polyphenol oxidase YfiH; S-methyl-5'-thioadenosine phosphorylase YfiH; EC; EC; EC 1.10.3.-; EC from Escherichia coli

57% id,
100% cov

PURNU_GEOS3 / P84138: Purine nucleoside phosphorylase YlmD; Adenosine deaminase YlmD; S-methyl-5'-thioadenosine phosphorylase YlmD; EC; EC; EC from Geobacillus stearothermophilus

34% id,
93% cov

PURNU_BACTN / Q89ZI8: Purine nucleoside phosphorylase BT_4389; Adenosine deaminase BT_4389; S-methyl-5'-thioadenosine phosphorylase BT_4389; EC; EC; EC from Bacteroides thetaiotaomicron

30% id,
93% cov


AO353_19295: hypothetical protein
is similar to:

PPNP_ECOLI / P0C037: Pyrimidine/purine nucleoside phosphorylase; Adenosine phosphorylase; Cytidine phosphorylase; Guanosine phosphorylase; Inosine phosphorylase; Thymidine phosphorylase; Uridine phosphorylase; Xanthosine phosphorylase; EC; EC from Escherichia coli
PpnP / b0391: nucleoside phosphorylase PpnP (EC; EC; EC; EC; EC from Escherichia coli
ppnP / P0C037: nucleoside phosphorylase PpnP (EC; EC; EC from Escherichia coli

55% id,
99% cov

AO353_00450: 5'-methylthioadenosine phosphorylase
is similar to:

PNPH_PYRFU / Q8U2I1: Probable 6-oxopurine nucleoside phosphorylase; Purine nucleoside phosphorylase; PNP; PfPNP; EC from Pyrococcus furiosus
Q8U2I1: purine-nucleoside phosphorylase (EC from Pyrococcus furiosus

42% id,
92% cov

salT / B0L7E7: chloro-purine nucleoside phosphorylase (EC from Salinispora tropica
B0L7E7: purine-nucleoside phosphorylase (EC from Salinispora tropica

44% id,
86% cov

Q97W94: purine-nucleoside phosphorylase (EC; S-methyl-5'-thioadenosine phosphorylase (EC from Saccharolobus solfataricus

36% id,
88% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory