Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E3 (pseudo3_N2E3)

Found 15 curated entries in PaperBLAST's database that match '2.6.1.27' as complete word(s).

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Pseudomonas fluorescens FW300-N2E3, or try another query

AO353_20540: aromatic amino acid aminotransferase
is similar to:
PaperBLAST

TyrB / b4054: tyrosine aminotransferase (EC 2.6.1.57; EC 2.6.1.6; EC 2.6.1.42; EC 2.6.1.1; EC 2.6.1.5; EC 2.6.1.27) from Escherichia coli

52% id,
100% cov

AspC / b0928: aspartate aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.7; EC 2.6.1.3) from Escherichia coli

47% id,
100% cov

AO353_18575: aromatic amino acid aminotransferase
is similar to:
PaperBLAST

AspC / b0928: aspartate aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.7; EC 2.6.1.3) from Escherichia coli

46% id,
99% cov

TyrB / b4054: tyrosine aminotransferase (EC 2.6.1.57; EC 2.6.1.6; EC 2.6.1.42; EC 2.6.1.1; EC 2.6.1.5; EC 2.6.1.27) from Escherichia coli

44% id,
99% cov

AO353_26655: branched-chain amino acid aminotransferase
is similar to:
PaperBLAST

IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli

32% id,
97% cov

AO353_22920: GntR family transcriptional regulator
is similar to:
PaperBLAST

A0A0D1E3F3: tryptophan transaminase (EC 2.6.1.27) from Ustilago maydis

25% id,
85% cov

AO353_29325: GntR family transcriptional regulator
is similar to:
PaperBLAST

A0A0D1E3F3: tryptophan transaminase (EC 2.6.1.27) from Ustilago maydis

23% id,
92% cov

S4UF58: tryptophan transaminase (EC 2.6.1.27) from Malassezia furfur

26% id,
73% cov

AO353_23080: GntR family transcriptional regulator
is similar to:
PaperBLAST

A0A0D1E3F3: tryptophan transaminase (EC 2.6.1.27) from Ustilago maydis

23% id,
91% cov

S4UF58: tryptophan transaminase (EC 2.6.1.27) from Malassezia furfur

26% id,
74% cov

AO353_01120: GntR family transcriptional regulator
is similar to:
PaperBLAST

A0A0D1E3F3: tryptophan transaminase (EC 2.6.1.27) from Ustilago maydis

24% id,
83% cov

AO353_17700: GntR family transcriptional regulator
is similar to:
PaperBLAST

S4UF58: tryptophan transaminase (EC 2.6.1.27) from Malassezia furfur

26% id,
70% cov

AO353_09180: GntR family transcriptional regulator
is similar to:
PaperBLAST

A0A0D1E3F3: tryptophan transaminase (EC 2.6.1.27) from Ustilago maydis

26% id,
66% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory