Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E3 (pseudo3_N2E3)

Found 6 curated entries in PaperBLAST's database that match '2.6.1.36' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 15 relevant proteins in Pseudomonas fluorescens FW300-N2E3, or try another query

AO353_11510: 4-aminobutyrate aminotransferase
is similar to:
PaperBLAST

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

38% id,
91% cov

P9WQ77: L-lysine 6-transaminase (EC 2.6.1.36) from Mycobacterium tuberculosis

29% id,
89% cov

A4F7V1: L-lysine 6-transaminase (EC 2.6.1.36) from Saccharopolyspora erythraea

28% id,
89% cov

More...

AO353_28215: 4-aminobutyrate aminotransferase
is similar to:
PaperBLAST

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

37% id,
92% cov

P9WQ77: L-lysine 6-transaminase (EC 2.6.1.36) from Mycobacterium tuberculosis

30% id,
94% cov

Q5XPV2: L-lysine 6-transaminase (EC 2.6.1.36) from Streptomyces clavuligerus

30% id,
92% cov

More...

AO353_16245: adenosylmethionine-8-amino-7-oxononanoate aminotransferase
is similar to:
PaperBLAST

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

32% id,
96% cov

Q5XPV2: L-lysine 6-transaminase (EC 2.6.1.36) from Streptomyces clavuligerus

24% id,
71% cov

lat / Q01767: lysine ε-aminotransferase (EC 2.6.1.36) from Streptomyces clavuligerus

24% id,
71% cov

More...

AO353_10500: acetylornithine aminotransferase
is similar to:
PaperBLAST

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

33% id,
89% cov

P9WQ77: L-lysine 6-transaminase (EC 2.6.1.36) from Mycobacterium tuberculosis

29% id,
91% cov

A4F7V1: L-lysine 6-transaminase (EC 2.6.1.36) from Saccharopolyspora erythraea

29% id,
91% cov

More...

AO353_15640: acetylornithine aminotransferase
is similar to:
PaperBLAST

A4F7V1: L-lysine 6-transaminase (EC 2.6.1.36) from Saccharopolyspora erythraea

31% id,
89% cov

P9WQ77: L-lysine 6-transaminase (EC 2.6.1.36) from Mycobacterium tuberculosis

31% id,
91% cov

Q5XPV2: L-lysine 6-transaminase (EC 2.6.1.36) from Streptomyces clavuligerus

27% id,
90% cov

More...

AO353_08585: aminotransferase
is similar to:
PaperBLAST

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

30% id,
93% cov

P9WQ77: L-lysine 6-transaminase (EC 2.6.1.36) from Mycobacterium tuberculosis

26% id,
91% cov

lat / Q01767: lysine ε-aminotransferase (EC 2.6.1.36) from Streptomyces clavuligerus

25% id,
78% cov

More...

AO353_11905: hypothetical protein
is similar to:
PaperBLAST

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

29% id,
92% cov

A4F7V1: L-lysine 6-transaminase (EC 2.6.1.36) from Saccharopolyspora erythraea

27% id,
91% cov

Q5XPV2: L-lysine 6-transaminase (EC 2.6.1.36) from Streptomyces clavuligerus

23% id,
94% cov

More...

AO353_15040: aminotransferase
is similar to:
PaperBLAST

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

29% id,
91% cov

Q5XPV2: L-lysine 6-transaminase (EC 2.6.1.36) from Streptomyces clavuligerus

27% id,
55% cov

lat / Q01767: lysine ε-aminotransferase (EC 2.6.1.36) from Streptomyces clavuligerus

27% id,
55% cov

More...

AO353_01090: hypothetical protein
is similar to:
PaperBLAST

P9WQ77: L-lysine 6-transaminase (EC 2.6.1.36) from Mycobacterium tuberculosis

28% id,
93% cov

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

27% id,
91% cov

Q5XPV2: L-lysine 6-transaminase (EC 2.6.1.36) from Streptomyces clavuligerus

27% id,
90% cov

More...

AO353_03025: acetylornithine aminotransferase
is similar to:
PaperBLAST

P9WQ77: L-lysine 6-transaminase (EC 2.6.1.36) from Mycobacterium tuberculosis

27% id,
91% cov

CA265_RS14455: L-lysine 6-transaminase (EC 2.6.1.36) from Pedobacter sp.

26% id,
93% cov

A4F7V1: L-lysine 6-transaminase (EC 2.6.1.36) from Saccharopolyspora erythraea

25% id,
91% cov

More...

AO353_06085: omega amino acid--pyruvate aminotransferase
is similar to:
PaperBLAST

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

30% id,
81% cov

A4F7V1: L-lysine 6-transaminase (EC 2.6.1.36) from Saccharopolyspora erythraea

23% id,
91% cov

AO353_08045: adenosylmethionine-8-amino-7-oxononanoate aminotransferase
is similar to:
PaperBLAST

P9WQ77: L-lysine 6-transaminase (EC 2.6.1.36) from Mycobacterium tuberculosis

24% id,
99% cov

Q5XPV2: L-lysine 6-transaminase (EC 2.6.1.36) from Streptomyces clavuligerus

25% id,
91% cov

lat / Q01767: lysine ε-aminotransferase (EC 2.6.1.36) from Streptomyces clavuligerus

25% id,
91% cov

AO353_06360: glutamate-1-semialdehyde 2,1-aminomutase
is similar to:
PaperBLAST

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

27% id,
81% cov

A4F7V1: L-lysine 6-transaminase (EC 2.6.1.36) from Saccharopolyspora erythraea

27% id,
79% cov

Q5XPV2: L-lysine 6-transaminase (EC 2.6.1.36) from Streptomyces clavuligerus

24% id,
75% cov

More...

AO353_07470: acetylornithine aminotransferase
is similar to:
PaperBLAST

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

32% id,
48% cov

AO353_17755: ornithinee aminotransferase
is similar to:
PaperBLAST

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

27% id,
56% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 15 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3460653-3461846 (frame +3) on CP012830
is similar to:
PaperBLAST

A4F7V1: L-lysine 6-transaminase (EC 2.6.1.36) from Saccharopolyspora erythraea
Also see hits to annotated proteins above

31% id,
93% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory