Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E3 (pseudo3_N2E3)

Found 75 curated entries in PaperBLAST's database that match '2.6.1.42'.

These curated entries have 59 distinct sequences.

Running ublast with E ≤ 0.01

Found 19 relevant proteins in Pseudomonas fluorescens FW300-N2E3, or try another query

AO353_26655: branched-chain amino acid aminotransferase
is similar to:
PaperBLAST

AO356_22970: Branched-chain amino acid aminotransferase (EC 2.6.1.42) from Pseudomonas fluorescens

94% id,
100% cov

Q9RTX5: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Deinococcus radiodurans

74% id,
94% cov

Q8DTW7: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Streptococcus mutans

66% id,
99% cov

More...

AO353_20540: aromatic amino acid aminotransferase
is similar to:
PaperBLAST

TyrB / b4054: tyrosine aminotransferase (EC 2.6.1.57; EC 2.6.1.6; EC 2.6.1.42; EC 2.6.1.1; EC 2.6.1.5; EC 2.6.1.27) from Escherichia coli

52% id,
100% cov

AO353_18575: aromatic amino acid aminotransferase
is similar to:
PaperBLAST

TyrB / b4054: tyrosine aminotransferase (EC 2.6.1.57; EC 2.6.1.6; EC 2.6.1.42; EC 2.6.1.1; EC 2.6.1.5; EC 2.6.1.27) from Escherichia coli

44% id,
99% cov

AO353_02295: GntR family transcriptional regulator
is similar to:
PaperBLAST

AZOBR_RS06555: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Azospirillum brasilense

37% id,
98% cov

A0A060PQX5: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermococcus sp.

36% id,
94% cov

BWI76_RS24235: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Klebsiella michiganensis

35% id,
98% cov

More...

AO353_09180: GntR family transcriptional regulator
is similar to:
PaperBLAST

A0A060PQX5: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermococcus sp.

33% id,
91% cov

AZOBR_RS06555: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Azospirillum brasilense

32% id,
93% cov

BWI76_RS24235: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Klebsiella michiganensis

29% id,
95% cov

More...

AO353_01120: GntR family transcriptional regulator
is similar to:
PaperBLAST

AZOBR_RS06555: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Azospirillum brasilense

31% id,
93% cov

A0A060PQX5: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermococcus sp.

30% id,
91% cov

BWI76_RS24235: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Klebsiella michiganensis

27% id,
96% cov

More...

AO353_01210: GntR family transcriptional regulator
is similar to:
PaperBLAST

BWI76_RS24235: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Klebsiella michiganensis

31% id,
92% cov

A0A060PQX5: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermococcus sp.

32% id,
91% cov

Ac3H11_1358: L-leucine transaminase; L-isoleucine transaminase (EC 2.6.1.42) from Acidovorax sp.

31% id,
91% cov

More...

AO353_17700: GntR family transcriptional regulator
is similar to:
PaperBLAST

AZOBR_RS06555: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Azospirillum brasilense

31% id,
90% cov

Ac3H11_1358: L-leucine transaminase; L-isoleucine transaminase (EC 2.6.1.42) from Acidovorax sp.

28% id,
95% cov

BWI76_RS24235: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Klebsiella michiganensis

25% id,
82% cov

AO353_10520: GntR family transcriptional regulator
is similar to:
PaperBLAST

AZOBR_RS06555: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Azospirillum brasilense

29% id,
96% cov

Ac3H11_1358: L-leucine transaminase; L-isoleucine transaminase (EC 2.6.1.42) from Acidovorax sp.

30% id,
92% cov

A0A060PQX5: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermococcus sp.

29% id,
89% cov

More...

AO353_22920: GntR family transcriptional regulator
is similar to:
PaperBLAST

A0A060PQX5: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermococcus sp.

29% id,
96% cov

AZOBR_RS06555: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Azospirillum brasilense

28% id,
93% cov

AO353_09990: GntR family transcriptional regulator
is similar to:
PaperBLAST

A0A060PQX5: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermococcus sp.

31% id,
86% cov

AZOBR_RS06555: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Azospirillum brasilense

30% id,
89% cov

Ac3H11_1358: L-leucine transaminase; L-isoleucine transaminase (EC 2.6.1.42) from Acidovorax sp.

30% id,
87% cov

AO353_22840: DNA-binding protein
is similar to:
PaperBLAST

AZOBR_RS06555: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Azospirillum brasilense

28% id,
91% cov

A0A060PQX5: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermococcus sp.

28% id,
89% cov

Ac3H11_1358: L-leucine transaminase; L-isoleucine transaminase (EC 2.6.1.42) from Acidovorax sp.

31% id,
69% cov

AO353_20995: transcriptional regulator
is similar to:
PaperBLAST

A0A060PQX5: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermococcus sp.

29% id,
88% cov

Ac3H11_1358: L-leucine transaminase; L-isoleucine transaminase (EC 2.6.1.42) from Acidovorax sp.

29% id,
88% cov

AZOBR_RS06555: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Azospirillum brasilense

27% id,
89% cov

More...

AO353_23080: GntR family transcriptional regulator
is similar to:
PaperBLAST

BWI76_RS24235: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Klebsiella michiganensis

28% id,
92% cov

Ac3H11_1358: L-leucine transaminase; L-isoleucine transaminase (EC 2.6.1.42) from Acidovorax sp.

27% id,
91% cov

A0A060PQX5: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermococcus sp.

27% id,
78% cov

AO353_29325: GntR family transcriptional regulator
is similar to:
PaperBLAST

A0A060PQX5: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermococcus sp.

26% id,
95% cov

Ac3H11_1358: L-leucine transaminase; L-isoleucine transaminase (EC 2.6.1.42) from Acidovorax sp.

26% id,
88% cov

BWI76_RS24235: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Klebsiella michiganensis

26% id,
85% cov

More...

AO353_01655: GntR family transcriptional regulator
is similar to:
PaperBLAST

BWI76_RS24235: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Klebsiella michiganensis

28% id,
89% cov

Ac3H11_1358: L-leucine transaminase; L-isoleucine transaminase (EC 2.6.1.42) from Acidovorax sp.

30% id,
77% cov

AZOBR_RS06555: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Azospirillum brasilense

28% id,
81% cov

More...

AO353_01350: 4-amino-4-deoxychorismate lyase
is similar to:
PaperBLAST

BPHYT_RS16285: Branched-chain amino acid aminotransferase (EC 2.6.1.42) from Burkholderia phytofirmans

27% id,
90% cov

ilvE / A6UWA0: branched-chain amino acid aminotransferase subunit (EC 2.6.1.6; EC 2.6.1.42) from Methanococcus aeolicus
A6UWA0: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Methanococcus aeolicus

25% id,
95% cov

P54691: branched-chain-amino-acid transaminase (EC 2.6.1.42); glutamate-prephenate aminotransferase (EC 2.6.1.79) from Synechocystis sp.

25% id,
89% cov

More...

AO353_14700: GntR family transcriptional regulator
is similar to:
PaperBLAST

A0A060PQX5: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermococcus sp.

23% id,
97% cov

AO353_24660: GntR family transcriptional regulator
is similar to:
PaperBLAST

BWI76_RS24235: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Klebsiella michiganensis

27% id,
83% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 21 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

291426-292241 (frame -1) on CP012830
is similar to:
PaperBLAST

N515DRAFT_2015: Branched-chain amino acid aminotransferase (EC 2.6.1.42) from Dyella japonica

28% id,
93% cov

F2L0W0: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermoproteus uzoniensis

27% id,
95% cov

ilvE / O86428: branched-chain-amino-acid aminotransferase subunit (EC 2.6.1.6; EC 2.6.1.42) from Pseudomonas aeruginosa
O86428: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Pseudomonas aeruginosa

26% id,
90% cov

More...

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory