Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E3 (pseudo3_N2E3)

Found 31 curated entries in PaperBLAST's database that match '2.6.1.52'.

These curated entries have 17 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Pseudomonas fluorescens FW300-N2E3, or try another query

AO353_02075: 3-phosphoserine/phosphohydroxythreonine aminotransferase
is similar to:
PaperBLAST

SERC_ECOLI / P23721: Phosphoserine aminotransferase; Phosphohydroxythreonine aminotransferase; PSAT; EC 2.6.1.52 from Escherichia coli
SerC / b0907: phosphoserine/phosphohydroxythreonine aminotransferase (EC 2.6.1.52; EC 2.6.1.17) from Escherichia coli
serC: phosphoserine aminotransferase; EC 2.6.1.52 from Escherichia coli
serC / P23721: phosphoserine/phosphohydroxythreonine aminotransferase (EC 2.6.1.52; EC 2.6.1.17) from Escherichia coli
P23721: phosphoserine transaminase (EC 2.6.1.52) from Escherichia coli

57% id,
99% cov

SERC_DROME / Q9VAN0: Probable phosphoserine aminotransferase; PSAT; Phosphohydroxythreonine aminotransferase; EC 2.6.1.52 from Drosophila melanogaster

51% id,
99% cov

Q2F5M8: phosphoserine transaminase (EC 2.6.1.52) from Bombyx mori

51% id,
99% cov

More...

AO353_10515: 3-phosphoserine/phosphohydroxythreonine aminotransferase
is similar to:
PaperBLAST

SERC_ECOLI / P23721: Phosphoserine aminotransferase; Phosphohydroxythreonine aminotransferase; PSAT; EC 2.6.1.52 from Escherichia coli
SerC / b0907: phosphoserine/phosphohydroxythreonine aminotransferase (EC 2.6.1.52; EC 2.6.1.17) from Escherichia coli
serC: phosphoserine aminotransferase; EC 2.6.1.52 from Escherichia coli
serC / P23721: phosphoserine/phosphohydroxythreonine aminotransferase (EC 2.6.1.52; EC 2.6.1.17) from Escherichia coli
P23721: phosphoserine transaminase (EC 2.6.1.52) from Escherichia coli

52% id,
100% cov

SERC_NIACI / Q59196: Phosphoserine aminotransferase; Phosphohydroxythreonine aminotransferase; PSAT; EC 2.6.1.52 from Niallia circulans
Q59196: phosphoserine transaminase (EC 2.6.1.52) from Niallia circulans

48% id,
99% cov

SERC_HUMAN / Q9Y617: Phosphoserine aminotransferase; Phosphohydroxythreonine aminotransferase; PSAT; EC 2.6.1.52 from Homo sapiens
PSAT1 / Q9Y617: Phosphoserine aminotransferase (EC 2.6.1.52) from Homo sapiens
Q9Y617: glycine transaminase (EC 2.6.1.4); phosphoserine transaminase (EC 2.6.1.52) from Homo sapiens

48% id,
97% cov

More...

AO353_20240: 2-aminoethylphosphonate--pyruvate aminotransferase
is similar to:
PaperBLAST

serC / P74281: serine—glyoxylate transaminase (EC 2.6.1.52) from Synechocystis sp.
P74281: phosphoserine transaminase (EC 2.6.1.52) from Synechocystis sp.

30% id,
94% cov

serC / Q58369: phosphoserine aminotransferase monomer (EC 2.6.1.1; EC 2.6.1.52) from Methanocaldococcus jannaschii

25% id,
95% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory