Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E3 (pseudo3_N2E3)

Found 9 curated entries in PaperBLAST's database that match '2.7.1.144' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Pseudomonas fluorescens FW300-N2E3, or try another query

AO353_05480: 1-phosphofructokinase
is similar to:
PaperBLAST

LACC_LACLL / P23391: Tagatose-6-phosphate kinase; Phosphotagatokinase; EC 2.7.1.144 from Lactococcus lactis

31% id,
99% cov

lacC / P0A0B8: D-tagatose-6-phosphate kinase subunit (EC 2.7.1.144) from Staphylococcus aureus
P0A0B9: tagatose-6-phosphate kinase (EC 2.7.1.144) from Staphylococcus aureus

30% id,
99% cov

PfkB / b1723: 6-phosphofructokinase 2 (EC 2.7.1.11; EC 2.7.1.144) from Escherichia coli
pfkB / P06999: 6-phosphofructokinase 2 (EC 2.7.1.11; EC 2.7.1.144) from Escherichia coli

31% id,
94% cov

More...

AO353_20835: ribokinase
is similar to:
PaperBLAST

PfkB / b1723: 6-phosphofructokinase 2 (EC 2.7.1.11; EC 2.7.1.144) from Escherichia coli
pfkB / P06999: 6-phosphofructokinase 2 (EC 2.7.1.11; EC 2.7.1.144) from Escherichia coli

26% id,
87% cov

lacC / P0A0B8: D-tagatose-6-phosphate kinase subunit (EC 2.7.1.144) from Staphylococcus aureus
P0A0B9: tagatose-6-phosphate kinase (EC 2.7.1.144) from Staphylococcus aureus

22% id,
87% cov

LACC_LACLL / P23391: Tagatose-6-phosphate kinase; Phosphotagatokinase; EC 2.7.1.144 from Lactococcus lactis

20% id,
83% cov

More...

AO353_26875: 2-dehydro-3-deoxygluconokinase
is similar to:
PaperBLAST

lacC / P0A0B8: D-tagatose-6-phosphate kinase subunit (EC 2.7.1.144) from Staphylococcus aureus
P0A0B9: tagatose-6-phosphate kinase (EC 2.7.1.144) from Staphylococcus aureus

31% id,
25% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory