Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E3 (pseudo3_N2E3)

Found 19 curated entries in PaperBLAST's database that match '2.7.1.165'.

These curated entries have 10 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Pseudomonas fluorescens FW300-N2E3, or try another query

AO353_26900: glycerate kinase
is similar to:
PaperBLAST

PS417_13970 / A0A1N7UI49: glycerate 2-kinase (EC 2.7.1.165) from Pseudomonas simiae

81% id,
100% cov

GLXK1_ECOLI / P23524: Glycerate 2-kinase; Glycerate kinase 1; GK1; EC 2.7.1.165 from Escherichia coli
YhaD / b3124: glycerate 2-kinase 1 (EC 2.7.1.165) from Escherichia coli
garK / P23524: glycerate 2-kinase 1 (EC 2.7.1.165) from Escherichia coli
P23524: glycerate 2-kinase (EC 2.7.1.165) from Escherichia coli

51% id,
97% cov

YbbZ / b0514: glycerate 2-kinase 2 (EC 2.7.1.165) from Escherichia coli
glxK / P77364: glycerate 2-kinase 2 (EC 2.7.1.165) from Escherichia coli
P77364: glycerate 2-kinase (EC 2.7.1.165) from Escherichia coli

50% id,
97% cov

More...

AO353_01935: hydroxypyruvate reductase
is similar to:
PaperBLAST

GCK_THEMA / Q9X1S1: D-glycerate 2-kinase; GCK; EC 2.7.1.165 from Thermotoga maritima
Q9X1S1: glycerate 2-kinase (EC 2.7.1.165) from Thermotoga maritima

41% id,
100% cov

GCK_PYRHO / O58231: Glycerate 2-kinase; GCK; 2-phosphoglycerate forming glycerate kinase; EC 2.7.1.165 from Pyrococcus horikoshii
O58231: glycerate 2-kinase (EC 2.7.1.165) from Pyrococcus horikoshii

39% id,
99% cov

Q703V9: glycerate 2-kinase (EC 2.7.1.165) from Thermoproteus tenax

34% id,
94% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory