Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E3 (pseudo3_N2E3)

Found 46 curated entries in PaperBLAST's database that match '2.7.1.4' as complete word(s).

These curated entries have 39 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Pseudomonas fluorescens FW300-N2E3, or try another query

AO353_25910: fructokinase
is similar to:
PaperBLAST

AO353_25910: Fructokinase (EC 2.7.1.4) from Pseudomonas fluorescens

100% id,
100% cov

PfGW456L13_3036: Fructokinase (EC 2.7.1.4) from Pseudomonas fluorescens

83% id,
100% cov

Dshi_2797: Fructokinase (EC 2.7.1.4) from Dinoroseobacter shibae

37% id,
99% cov

More...

AO353_25105: sugar kinase
is similar to:
PaperBLAST

AO356_00035: Fructokinase (EC 2.7.1.4) from Pseudomonas fluorescens

69% id,
98% cov

Pf6N2E2_1965: Fructokinase (EC 2.7.1.4) from Pseudomonas fluorescens

69% id,
97% cov

BPHYT_RS02045: Fructokinase (EC 2.7.1.4) from Burkholderia phytofirmans

47% id,
97% cov

More...

AO353_26875: 2-dehydro-3-deoxygluconokinase
is similar to:
PaperBLAST

cscK / GB|CAA57218.2: fructokinase; EC 2.7.1.4 from Escherichia coli

32% id,
96% cov

scrK / GB|AAA08602.1: fructokinase; EC 2.7.1.4 from Salmonella enterica

30% id,
96% cov

SCRK_KLEPN / P26420: Fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / GB|CAA43322.1: fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / P26420: fructokinase (EC 2.7.1.4) from Klebsiella pneumoniae

31% id,
91% cov

More...

AO353_20835: ribokinase
is similar to:
PaperBLAST

scrK / GB|AAA08602.1: fructokinase; EC 2.7.1.4 from Salmonella enterica

29% id,
99% cov

SCRK_KLEPN / P26420: Fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / GB|CAA43322.1: fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / P26420: fructokinase (EC 2.7.1.4) from Klebsiella pneumoniae

28% id,
99% cov

N515DRAFT_1919: Fructokinase (EC 2.7.1.4) from Dyella japonica

26% id,
99% cov

More...

AO353_21745: ketodeoxygluconokinase
is similar to:
PaperBLAST

SCRK1_MAIZE / Q6XZ79: Fructokinase-1; ZmFRK1; EC 2.7.1.4 from Zea mays

27% id,
85% cov

SCRK1_ORYSI / A2WXV8: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

28% id,
81% cov

SCRK1_ORYSJ / Q0JGZ6: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

28% id,
81% cov

More...

AO353_21335: 5-dehydro-2-deoxygluconokinase
is similar to:
PaperBLAST

Echvi_2804: Fructokinase (EC 2.7.1.4) from Echinicola vietnamensis

22% id,
94% cov

cscK / GB|CAA57218.2: fructokinase; EC 2.7.1.4 from Escherichia coli

35% id,
35% cov

AO353_05480: 1-phosphofructokinase
is similar to:
PaperBLAST

BPHYT_RS02045: Fructokinase (EC 2.7.1.4) from Burkholderia phytofirmans

31% id,
55% cov

Dshi_2797: Fructokinase (EC 2.7.1.4) from Dinoroseobacter shibae

36% id,
32% cov

frk / GB|AAB52373.1: fructokinase; EC 2.7.1.4 from Rhizobium leguminosarum

38% id,
29% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory