Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E3 (pseudo3_N2E3)

Found 182 curated entries in PaperBLAST's database that match '3.2.1.20' as complete word(s).

These curated entries have 139 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Pseudomonas fluorescens FW300-N2E3, or try another query

AO353_15985: trehalose-6-phosphate hydrolase
is similar to:
PaperBLAST

AAF71997.1: α-glucosidase (EC 3.2.1.20)

58% id,
99% cov

CAA54266.1: α-glucosidase (EC 3.2.1.20)

49% id,
96% cov

AAA25570.1: α-glucosidase (Agl) (EC 3.2.1.20)

46% id,
99% cov

More...

AO353_22940: alpha-amylase
is similar to:
PaperBLAST

Psest_0870: Alpha-glucosidase (EC 3.2.1.20) from Pseudomonas stutzeri

34% id,
93% cov

Shewana3_2311: Alpha-glucosidase (EC 3.2.1.20) from Shewanella sp.

31% id,
99% cov

BAI67603.1: α-glucosidase (CmmB) (EC 3.2.1.20)

32% id,
94% cov

More...

AO353_23760: maltooligosyl trehalose synthase
is similar to:
PaperBLAST

MalZ / b0403: maltodextrin glucosidase (EC 3.2.1.20) from Escherichia coli
malZ / P21517: maltodextrin glucosidase (EC 3.2.1.20) from Escherichia coli
P21517: alpha-glucosidase (EC 3.2.1.20) from Escherichia coli

31% id,
23% cov

AIZ92452.1: α-glucosidase Z (EO53_16270;MalZ;b0403) (EC 3.2.1.20)
BAE76183.1: maltodextrin glucosidase (MalZ) (EC 3.2.1.20)

31% id,
23% cov

AO353_23770: malto-oligosyltrehalose trehalohydrolase
is similar to:
PaperBLAST

BAI67603.1: α-glucosidase (CmmB) (EC 3.2.1.20)

34% id,
18% cov

CAB46746.1: α-glucosidase (maltase mal22) (EC 3.2.1.20)

36% id,
16% cov

AO353_22935: alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase
is similar to:
PaperBLAST

MAL1_DROME / P07190: Maltase A1; Larval visceral protein H; EC 3.2.1.20 from Drosophila melanogaster
AAF59089.3: α-glucosidase H (LvpH; RE72980p) (EC 3.2.1.20)

25% id,
23% cov

AO353_22750: glucosidase
is similar to:
PaperBLAST

Q2V621: mannosyl-oligosaccharide glucosidase (EC 3.2.1.106); alpha-glucosidase (EC 3.2.1.20); mannosyl-oligosaccharide alpha-1,3-glucosidase (EC 3.2.1.207) from Candida albicans

24% id,
15% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory