Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E3 (pseudo3_N2E3)

Found 14 curated entries in PaperBLAST's database that match '3.2.1.48' as complete word(s).

These curated entries have 13 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Pseudomonas fluorescens FW300-N2E3, or try another query

AO353_25135: glycosyl hydrolase family 32
is similar to:
PaperBLAST

Pf1N1B4_5116: Sucrose alpha-glucosidase (EC 3.2.1.48) from Pseudomonas fluorescens

91% id,
100% cov

Pf6N2E2_1650: Sucrose alpha-glucosidase (EC 3.2.1.48) from Pseudomonas fluorescens

85% id,
98% cov

AO356_28590: sucrose alpha-glucosidase (EC 3.2.1.48) from Pseudomonas fluorescens

84% id,
98% cov

AO353_15985: trehalose-6-phosphate hydrolase
is similar to:
PaperBLAST

Dshi_1649: alpha-glucosidase / maltase / trehalase / sucrase (EC 3.2.1.48; EC 3.2.1.20; EC 3.2.1.28) from Dinoroseobacter shibae

35% id,
90% cov

AO353_22940: alpha-amylase
is similar to:
PaperBLAST

Dshi_1649: alpha-glucosidase / maltase / trehalase / sucrase (EC 3.2.1.48; EC 3.2.1.20; EC 3.2.1.28) from Dinoroseobacter shibae

43% id,
46% cov

Q6UVM5: sucrose alpha-glucosidase (EC 3.2.1.48) from Xanthomonas axonopodis

32% id,
48% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory