Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E3 (pseudo3_N2E3)

Found 17 curated entries in PaperBLAST's database that match '3.2.1.93' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Pseudomonas fluorescens FW300-N2E3, or try another query

AO353_15985: trehalose-6-phosphate hydrolase
is similar to:		 PaperBLAST

AO353_15985: Alpha,alpha-phosphotrehalase (EC 3.2.1.93) from Pseudomonas fluorescens

 100% id,
100% cov

AAG31032.1: trehalose-6-phosphate hydrolase (TreA) (EC 3.2.1.93)

 88% id,
100% cov

PS417_23045: Alpha,alpha-phosphotrehalase (EC 3.2.1.93) from Pseudomonas simiae

 87% id,
100% cov

More...

AO353_22940: alpha-amylase
is similar to:		 PaperBLAST

TREC_ECOLI / P28904: Trehalose-6-phosphate hydrolase; Alpha,alpha-phosphotrehalase; EC 3.2.1.93 from Escherichia coli
TreE / b4239: trehalose-6-phosphate hydrolase (EC 3.2.1.93) from Escherichia coli
AAC77196.1: trehalose-6-phosphate hydrolase (TreC) (EC 3.2.1.93)
treC / P28904: trehalose-6-phosphate hydrolase (EC 3.2.1.93) from Escherichia coli

 32% id,
92% cov

BAB38639.1: trehalose 6-P hydrolase (ECs5216) (EC 3.2.1.93)

 32% id,
93% cov

TREC_BACSU / P39795: Trehalose-6-phosphate hydrolase; Alpha,alpha-phosphotrehalase; Phospho-alpha-(1-1)-glucosidase; EC 3.2.1.93 from Bacillus subtilis
CAB12610.1: trehalose-6-phosphate hydrolase (TreA;BSU07810) (EC 3.2.1.93)
treA / P39795: trehalose-6-phosphate hydrolase (EC 3.2.1.93) from Bacillus subtilis

 37% id,
58% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory