Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E3 (pseudo3_N2E3)

Found 16 curated entries in PaperBLAST's database that match '3.5.2.7' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Pseudomonas fluorescens FW300-N2E3, or try another query

AO353_12280: imidazolonepropionase
is similar to:
PaperBLAST

AO353_12280: Imidazolonepropionase (EC 3.5.2.7) from Pseudomonas fluorescens

100% id,
100% cov

Pf1N1B4_1579: Imidazolonepropionase (EC 3.5.2.7) from Pseudomonas fluorescens

92% id,
100% cov

PfGW456L13_317: Imidazolonepropionase (EC 3.5.2.7) from Pseudomonas fluorescens

92% id,
100% cov

More...

AO353_02090: N-ethylammeline chlorohydrolase
is similar to:
PaperBLAST

SO0095: Imidazolonepropionase (EC 3.5.2.7) from Shewanella oneidensis

28% id,
58% cov

HUTI_AGRFC / Q8U8Z6: Imidazolonepropionase; Imidazolone-5-propanoate hydrolase; Imidazolone-5-propionate hydrolase; EC 3.5.2.7 from Agrobacterium fabrum
Q8U8Z6: imidazolonepropionase (EC 3.5.2.7) from Agrobacterium tumefaciens

27% id,
46% cov

AO356_09595: Imidazolonepropionase (EC 3.5.2.7) from Pseudomonas fluorescens

25% id,
46% cov

More...

AO353_22690: amidohydrolase
is similar to:
PaperBLAST

hutI / O31200: imidazolonepropionase (EC 3.5.2.7) from Pseudomonas putida

29% id,
44% cov

Pf1N1B4_1579: Imidazolonepropionase (EC 3.5.2.7) from Pseudomonas fluorescens

25% id,
49% cov

SO0095: Imidazolonepropionase (EC 3.5.2.7) from Shewanella oneidensis

26% id,
37% cov

More...

AO353_06110: 8-oxoguanine deaminase
is similar to:
PaperBLAST

PGA1_c36350: Imidazolonepropionase (EC 3.5.2.7) from Phaeobacter inhibens

24% id,
45% cov

AO353_22275: amidohydrolase
is similar to:
PaperBLAST

HUTI_BACSU / P42084: Imidazolonepropionase; Imidazolone-5-propionate hydrolase; EC 3.5.2.7 from Bacillus subtilis
P42084: imidazolonepropionase (EC 3.5.2.7) from Bacillus subtilis

31% id,
24% cov

HUTI_AGRFC / Q8U8Z6: Imidazolonepropionase; Imidazolone-5-propanoate hydrolase; Imidazolone-5-propionate hydrolase; EC 3.5.2.7 from Agrobacterium fabrum
Q8U8Z6: imidazolonepropionase (EC 3.5.2.7) from Agrobacterium tumefaciens

29% id,
22% cov

SM_b21166: Imidazolonepropionase (EC 3.5.2.7) from Sinorhizobium meliloti

32% id,
18% cov

AO353_22770: amidohydrolase
is similar to:
PaperBLAST

SM_b21166: Imidazolonepropionase (EC 3.5.2.7) from Sinorhizobium meliloti

29% id,
20% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory