Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E3 (pseudo3_N2E3)

Found 18 curated entries in PaperBLAST's database that match '3.5.3.12'.

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Pseudomonas fluorescens FW300-N2E3, or try another query

AO353_11915: agmatine deiminase
is similar to:
PaperBLAST

AO356_10030: Agmatine deiminase (EC 3.5.3.12) from Pseudomonas fluorescens

92% id,
99% cov

AGUA_PSEAE / Q9I6J9: Agmatine deiminase; Agmatine iminohydrolase; EC 3.5.3.12 from Pseudomonas aeruginosa
aguA / Q9I6J9: agmatine deiminase subunit (EC 3.5.3.12) from Pseudomonas aeruginosa
Q9I6J9: agmatine deiminase (EC 3.5.3.12) from Pseudomonas aeruginosa

79% id,
100% cov

A0A0H3G8U9: agmatine deiminase (EC 3.5.3.12) from Listeria monocytogenes

59% id,
99% cov

More...

AO353_28745: peptidyl-arginine deiminase
is similar to:
PaperBLAST

A0A0H2Z8C6: agmatine deiminase (EC 3.5.3.12) from Pseudomonas aeruginosa

76% id,
99% cov

AGUA_PSEAE / Q9I6J9: Agmatine deiminase; Agmatine iminohydrolase; EC 3.5.3.12 from Pseudomonas aeruginosa
aguA / Q9I6J9: agmatine deiminase subunit (EC 3.5.3.12) from Pseudomonas aeruginosa
Q9I6J9: agmatine deiminase (EC 3.5.3.12) from Pseudomonas aeruginosa

40% id,
97% cov

AGUA_MEDTR / G7JT50: Agmatine deiminase; Agmatine iminohydrolase; MtAIH; EC 3.5.3.12 from Medicago truncatula

39% id,
99% cov

More...

AO353_28730: agmatine deiminase
is similar to:
PaperBLAST

A0A0H2Z743: agmatine deiminase (EC 3.5.3.12) from Pseudomonas aeruginosa

61% id,
99% cov

A0A0H2Z8C6: agmatine deiminase (EC 3.5.3.12) from Pseudomonas aeruginosa

37% id,
97% cov

A0A0H3G8U9: agmatine deiminase (EC 3.5.3.12) from Listeria monocytogenes

34% id,
97% cov

More...

AO353_28700: hypothetical protein
is similar to:
PaperBLAST

A0A0H2Z743: agmatine deiminase (EC 3.5.3.12) from Pseudomonas aeruginosa

63% id,
28% cov

AGUA_MEDTR / G7JT50: Agmatine deiminase; Agmatine iminohydrolase; MtAIH; EC 3.5.3.12 from Medicago truncatula

34% id,
30% cov

AGUA_ARATH / Q8GWW7: Agmatine deiminase; Agmatine iminohydrolase; Protein EMBRYO DEFECTIVE 1873; EC 3.5.3.12 from Arabidopsis thaliana
At5g08170 / Q8GWW7: agmatine iminohydrolase (EC 3.5.3.12) from Arabidopsis thaliana

29% id,
29% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory