Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E3 (pseudo3_N2E3)

Found 17 curated entries in PaperBLAST's database that match '3.7.1.3' as complete word(s).

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Pseudomonas fluorescens FW300-N2E3, or try another query

AO353_05935: kynureninase
is similar to:
PaperBLAST

AO353_05935: Kynureninase (EC 3.7.1.3) from Pseudomonas fluorescens

100% id,
100% cov

PfGW456L13_4288: Kynureninase (EC 3.7.1.3) from Pseudomonas fluorescens

90% id,
100% cov

KYNU_PSEFL / P83788: Kynureninase; L-kynurenine hydrolase; EC 3.7.1.3 from Pseudomonas fluorescens
kyn / P83788: kynureninase subunit (EC 3.7.1.3) from Pseudomonas fluorescens
P83788: kynureninase (EC 3.7.1.3) from Pseudomonas fluorescens

89% id,
100% cov

More...

AO353_01320: class V aminotransferase
is similar to:
PaperBLAST

KYNU_PSEFL / P83788: Kynureninase; L-kynurenine hydrolase; EC 3.7.1.3 from Pseudomonas fluorescens
kyn / P83788: kynureninase subunit (EC 3.7.1.3) from Pseudomonas fluorescens
P83788: kynureninase (EC 3.7.1.3) from Pseudomonas fluorescens

25% id,
91% cov

AO353_05935: Kynureninase (EC 3.7.1.3) from Pseudomonas fluorescens

25% id,
91% cov

PS417_23650: Kynureninase (EC 3.7.1.3) from Pseudomonas simiae

25% id,
91% cov

More...

AO353_20240: 2-aminoethylphosphonate--pyruvate aminotransferase
is similar to:
PaperBLAST

PfGW456L13_4288: Kynureninase (EC 3.7.1.3) from Pseudomonas fluorescens

24% id,
60% cov

PS417_23650: Kynureninase (EC 3.7.1.3) from Pseudomonas simiae

24% id,
60% cov

KYNU_PSEFL / P83788: Kynureninase; L-kynurenine hydrolase; EC 3.7.1.3 from Pseudomonas fluorescens
kyn / P83788: kynureninase subunit (EC 3.7.1.3) from Pseudomonas fluorescens
P83788: kynureninase (EC 3.7.1.3) from Pseudomonas fluorescens

23% id,
60% cov

More...

AO353_20695: O-succinylhomoserine sulfhydrylase
is similar to:
PaperBLAST

RR42_RS15385: Kynureninase (EC 3.7.1.3) from Cupriavidus basilensis

28% id,
45% cov

AO353_24935: cysteine sulfinate desulfinase
is similar to:
PaperBLAST

RR42_RS15385: Kynureninase (EC 3.7.1.3) from Cupriavidus basilensis

24% id,
37% cov

AO353_03340: class V aminotransferase
is similar to:
PaperBLAST

KYNU_HUMAN / Q16719: Kynureninase; L-kynurenine hydrolase; EC 3.7.1.3 from Homo sapiens
KYNU / Q16719: Kynureninase (EC 3.7.1.3) from Homo sapiens
Q16719: kynureninase (EC 3.7.1.3) from Homo sapiens

26% id,
21% cov

KYNU_MOUSE / Q9CXF0: Kynureninase; L-kynurenine hydrolase; EC 3.7.1.3 from Mus musculus

35% id,
12% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory