Searching in Pseudomonas fluorescens FW300-N2E3 (pseudo3_N2E3)
Found 68 curated entries in PaperBLAST's database that match '4.2.1.10' as complete word(s).
These curated entries have 50 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Pseudomonas fluorescens FW300-N2E3, or try another query
AO353_13685: 3-dehydroquinate dehydratase is similar to: | PaperBLAST |
O30557: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Pseudomonas aeruginosa | 91% id, 99% cov |
Q0VMZ2: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Alcanivorax borkumensis | 77% id, 91% cov |
A0A0H3FM50: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Klebsiella aerogenes | 68% id, 95% cov |
AO353_06170: 3-dehydroquinate dehydratase is similar to: | PaperBLAST |
I0L192: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Micromonospora lupini | 58% id, 97% cov |
O30557: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Pseudomonas aeruginosa | 58% id, 97% cov |
N1V364: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Arthrobacter crystallopoietes | 61% id, 90% cov |
AO353_06175: shikimate dehydrogenase is similar to: | PaperBLAST |
Q6PUG0: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Nicotiana tabacum | 32% id, 53% cov |
DHQSD_ARATH / Q9SQT8: Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic; DHQ-SDH protein; DHQase-SORase; Protein EMBRYO DEFECTIVE 3004; EC 4.2.1.10; EC 1.1.1.25 from Arabidopsis thaliana | 33% id, 45% cov |
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae | 26% id, 17% cov |
AO353_19825: shikimate dehydrogenase is similar to: | PaperBLAST |
Q6PUG0: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Nicotiana tabacum | 29% id, 55% cov |
Q6PUF9: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Nicotiana tabacum | 29% id, 48% cov |
DHQSD_ARATH / Q9SQT8: Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic; DHQ-SDH protein; DHQase-SORase; Protein EMBRYO DEFECTIVE 3004; EC 4.2.1.10; EC 1.1.1.25 from Arabidopsis thaliana | 29% id, 42% cov |
AO353_12505: 3-dehydroquinate synthase is similar to: | PaperBLAST |
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae | 37% id, 23% cov |
ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans | 39% id, 21% cov |
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae | 34% id, 10% cov |
AO353_14780: glutamyl-tRNA reductase is similar to: | PaperBLAST |
Q6PUF9: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Nicotiana tabacum | 28% id, 19% cov |
A0A5H2WZU5: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Eucalyptus camaldulensis | 35% id, 14% cov |
A0A5H2X4C4: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Eucalyptus camaldulensis | 33% id, 14% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
1376703-1377941 (frame +3) on CP012830 is similar to: | PaperBLAST |
Q6PUG0: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Nicotiana tabacum | 32% id, 55% cov |
4358224-4359063 (frame +1) on CP012830 is similar to: | PaperBLAST |
Q6PUG0: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Nicotiana tabacum | 28% id, 57% cov |
Q6PUF9: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Nicotiana tabacum | 28% id, 50% cov |
DHQSD_ARATH / Q9SQT8: Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic; DHQ-SDH protein; DHQase-SORase; Protein EMBRYO DEFECTIVE 3004; EC 4.2.1.10; EC 1.1.1.25 from Arabidopsis thaliana | 28% id, 48% cov |
Lawrence Berkeley National Laboratory