Curated BLAST for Genomes


Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E3 (pseudo3_N2E3)

Found 3 curated entries in PaperBLAST's database that match ''.

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pseudomonas fluorescens FW300-N2E3, or try another query

AO353_03795: fumarate hydratase
is similar to:

Q141Z6: fumarate hydratase (EC; (S)-2-methylmalate dehydratase (EC from Paraburkholderia xenovorans

75% id,
96% cov

P0AC33: fumarate hydratase (EC; (S)-2-methylmalate dehydratase (EC from Escherichia coli

32% id,
91% cov

P14407: fumarate hydratase (EC; (S)-2-methylmalate dehydratase (EC from Escherichia coli

31% id,
91% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory