Curated BLAST for Genomes


Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E3 (pseudo3_N2E3)

Found 8 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pseudomonas fluorescens FW300-N2E3, or try another query

AO353_23515: muconate cycloisomerase
is similar to:

catB / A0F0B3: muconate cycloisomerase (EC from Pseudomonas reinekei

93% id,
100% cov

Q4K9X1: Muconate cycloisomerase (EC from Pseudomonas fluorescens

93% id,
99% cov

PS417_23670: Muconate cycloisomerase (EC from Pseudomonas simiae

91% id,
99% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory