Searching in Pseudomonas fluorescens FW300-N2E3 (pseudo3_N2E3)
Found 34 curated entries in PaperBLAST's database that match '5.5.1.2'.
These curated entries have 20 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Pseudomonas fluorescens FW300-N2E3, or try another query
| AO353_17225: 3-carboxy-cis,cis-muconate cycloisomerase is similar to: | PaperBLAST |
RR42_RS32055: 3-carboxymuconate cycloisomerase PcaB (EC 5.5.1.2) from Cupriavidus basilensis | 54% id, 97% cov |
pcaB2 / Q2HNY9: 3-carboxymuconate lactonizing enzyme type 2 (EC 5.5.1.2) from Hydrogenophaga intermedia | 41% id, 92% cov |
Q2HNZ1: 3-Carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2) from Agrobacterium tumefaciens | 36% id, 93% cov |
| AO353_23515: muconate cycloisomerase is similar to: | PaperBLAST |
ACI_STRCO / Q9RKF7: 3,6-anhydro-alpha-L-galactonate cycloisomerase; AHGA cycloisomerase; EC 5.5.1.25 from Streptomyces coelicolor | 27% id, 98% cov |
GCI_AGRFC / A9CEQ8: D-galactarolactone cycloisomerase; EC 5.5.1.27 from Agrobacterium fabrum | 24% id, 98% cov |
| AO353_29040: glucarate dehydratase is similar to: | PaperBLAST |
GCI_AGRFC / A9CEQ8: D-galactarolactone cycloisomerase; EC 5.5.1.27 from Agrobacterium fabrum | 24% id, 90% cov |
| AO353_09000: argininosuccinate lyase is similar to: | PaperBLAST |
Q2HNZ1: 3-Carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2) from Agrobacterium tumefaciens | 23% id, 75% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 1975945-1977426 (frame +1) on CP012830 is similar to: | PaperBLAST |
Q2HNZ1: 3-Carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2) from Agrobacterium tumefaciens | 23% id, 79% cov |
Lawrence Berkeley National Laboratory