Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E3 (pseudo3_N2E3)

Found 193 curated entries in PaperBLAST's database that match '6.2.1.1'.

These curated entries have 146 distinct sequences.

Running ublast with E ≤ 0.01

Found 21 relevant proteins in Pseudomonas fluorescens FW300-N2E3, or try another query

AO353_03060: acetyl-CoA synthetase
is similar to:
PaperBLAST

AO353_03060: Acetyl-coenzyme A synthetase (EC 6.2.1.1) from Pseudomonas fluorescens

100% id,
100% cov

AO356_18695: Acetyl-coenzyme A synthetase (EC 6.2.1.1) from Pseudomonas fluorescens

95% id,
100% cov

ACSA_ECOLI / P27550: Acetyl-coenzyme A synthetase; AcCoA synthetase; Acs; Acetate--CoA ligase; Acyl-activating enzyme; EC 6.2.1.1 from Escherichia coli
AcsA / b4069: acetyl-CoA synthetase (AMP-forming) (EC 6.2.1.1; EC 6.2.1.17) from Escherichia coli
acs / P27550: acetyl-CoA synthetase (AMP-forming) (EC 6.2.1.17; EC 6.2.1.1) from Escherichia coli

68% id,
99% cov

More...

AO353_14365: acetyl-CoA synthetase
is similar to:
PaperBLAST

AO356_18695: Acetyl-coenzyme A synthetase (EC 6.2.1.1) from Pseudomonas fluorescens

62% id,
100% cov

AO353_03060: Acetyl-coenzyme A synthetase (EC 6.2.1.1) from Pseudomonas fluorescens

61% id,
100% cov

ACSA_SALTY / Q8ZKF6: Acetyl-coenzyme A synthetase; AcCoA synthetase; Acs; Acetate--CoA ligase; Acyl-activating enzyme; EC 6.2.1.1 from Salmonella typhimurium

61% id,
96% cov

More...

AO353_20355: AMP-binding protein
is similar to:
PaperBLAST

Ac3H11_3009: Acetoacetate--CoA ligase (EC 6.2.1.16) from Acidovorax sp.

56% id,
97% cov

F1CYZ6: 4-coumarate-CoA ligase (EC 6.2.1.12) from Acetobacterium woodii

32% id,
96% cov

A0A0D4C3L0: 4-coumarate-CoA ligase (EC 6.2.1.12) from Plagiochasma appendiculatum

28% id,
97% cov

More...

AO353_21765: acetoacetyl-CoA synthetase
is similar to:
PaperBLAST

AACS_RHIME / Q9Z3R3: Acetoacetyl-coenzyme A synthetase; Acetoacetyl-CoA synthetase; EC 6.2.1.16 from Rhizobium meliloti
SMc00774: Acetoacetate--CoA ligase (EC 6.2.1.16) from Sinorhizobium meliloti
Q9Z3R3: acetoacetate-CoA ligase (EC 6.2.1.16) from Sinorhizobium meliloti

54% id,
99% cov

AACS_MOUSE / Q9D2R0: Acetoacetyl-CoA synthetase; EC 6.2.1.16 from Mus musculus
Q9D2R0: acetoacetate-CoA ligase (EC 6.2.1.16) from Mus musculus

45% id,
98% cov

AACS_RAT / Q9JMI1: Acetoacetyl-CoA synthetase; EC 6.2.1.16 from Rattus norvegicus

44% id,
98% cov

More...

AO353_19945: acetyl-CoA synthetase
is similar to:
PaperBLAST

ACSA_BACSU / P39062: Acetyl-coenzyme A synthetase; AcCoA synthetase; Acs; Acetate--CoA ligase; Acyl-activating enzyme; EC 6.2.1.1 from Bacillus subtilis

46% id,
98% cov

Q2XNL6: acetate-CoA ligase (EC 6.2.1.1) from Methanothermobacter thermautotrophicus

39% id,
88% cov

Q2I0L7: acetate-CoA ligase (EC 6.2.1.1) from Methanothermobacter thermautotrophicus

39% id,
88% cov

More...

AO353_02215: long-chain acyl-CoA synthetase
is similar to:
PaperBLAST

S27A6_MOUSE / E9Q9W4: Long-chain fatty acid transport protein 6; FATP-6; Fatty acid transport protein 6; Arachidonate--CoA ligase; Fatty-acid-coenzyme A ligase, very long-chain 2; Long-chain-fatty-acid--CoA ligase; Solute carrier family 27 member 6; Very long-chain acyl-CoA synthetase homolog 1; VLACS2; VLCSH1; mVLCS-H1; EC 6.2.1.15; EC 6.2.1.3; EC 6.2.1.- from Mus musculus

40% id,
89% cov

S27A6_HUMAN / Q9Y2P4: Long-chain fatty acid transport protein 6; FATP-6; Fatty acid transport protein 6; Arachidonate--CoA ligase; Fatty-acid-coenzyme A ligase, very long-chain 2; Long-chain-fatty-acid--CoA ligase; Solute carrier family 27 member 6; Very long-chain acyl-CoA synthetase homolog 1; VLCSH1; hVLCS-H1; EC 6.2.1.15; EC 6.2.1.3; EC 6.2.1.- from Homo sapiens

38% id,
90% cov

S27A2_RAT / P97524: Long-chain fatty acid transport protein 2; Arachidonate--CoA ligase; Fatty acid transport protein 2; FATP-2; Fatty-acid-coenzyme A ligase, very long-chain 1; Long-chain-fatty-acid--CoA ligase; Phytanate--CoA ligase; Solute carrier family 27 member 2; THCA-CoA ligase; Very long-chain acyl-CoA synthetase; VLACS; VLCS; Very long-chain-fatty-acid-CoA ligase; EC 6.2.1.15; EC 6.2.1.3; EC 6.2.1.24; EC 6.2.1.7; EC 6.2.1.- from Rattus norvegicus

39% id,
89% cov

More...

AO353_25695: AMP-binding protein
is similar to:
PaperBLAST

ACSA_BACSU / P39062: Acetyl-coenzyme A synthetase; AcCoA synthetase; Acs; Acetate--CoA ligase; Acyl-activating enzyme; EC 6.2.1.1 from Bacillus subtilis

38% id,
94% cov

HBCL1_METS5 / A4YDT1: 4-hydroxybutyrate--CoA ligase 1; Acetate--CoA ligase; Butyrate--CoA ligase; Propionate--CoA ligase; EC 6.2.1.40; EC 6.2.1.1; EC 6.2.1.2; EC 6.2.1.17 from Metallosphaera sedula

35% id,
89% cov

ACSM3_MOUSE / Q3UNX5: Acyl-coenzyme A synthetase ACSM3, mitochondrial; Acyl-CoA synthetase medium-chain family member 3; Butyrate--CoA ligase 3; Butyryl-coenzyme A synthetase 3; Middle-chain acyl-CoA synthetase 3; Propionate--CoA ligase; Protein SA homolog; EC 6.2.1.2; EC 6.2.1.17 from Mus musculus

35% id,
86% cov

More...

AO353_24840: acyl-CoA synthetase
is similar to:
PaperBLAST

ACDB2_PYRFU / Q8TZY8: Acetate--CoA ligase [ADP-forming] II subunit beta; ADP-forming acetyl coenzyme A synthetase II subunit beta; ACS II subunit beta; EC 6.2.1.13 from Pyrococcus furiosus

33% id,
95% cov

Q5JIA9: acetate-CoA ligase (ADP-forming) (subunit 1/2) (EC 6.2.1.13) from Thermococcus kodakarensis

36% id,
88% cov

ACDB1_PYRFU / E7FHP1: Acetate--CoA ligase [ADP-forming] I subunit beta; ADP-forming acetyl coenzyme A synthetase I subunit beta; ACS I subunit beta; EC 6.2.1.13 from Pyrococcus furiosus
acdB / E7FHP1: acetate-CoA ligase β subunit (EC 6.2.1.13) from Pyrococcus furiosus

32% id,
94% cov

More...

AO353_21070: long-chain fatty acid--CoA ligase
is similar to:
PaperBLAST

HBCL2_METS5 / A4YDR9: 4-hydroxybutyrate--CoA ligase 2; Acetate--CoA ligase; Butyrate--CoA ligase; Propionate--CoA ligase; acyl-activating enzyme; EC 6.2.1.40; EC 6.2.1.1; EC 6.2.1.2; EC 6.2.1.17 from Metallosphaera sedula

32% id,
96% cov

AEE7_ARATH / Q8VZF1: Acetate/butyrate--CoA ligase AAE7, peroxisomal; AMP-binding protein 7; AtAMPBP7; Acetyl-CoA synthetase; Acyl-activating enzyme 7; Butyryl-CoA synthetase; Protein ACETATE NON-UTILIZING 1; EC 6.2.1.1; EC 6.2.1.2 from Arabidopsis thaliana

32% id,
92% cov

CCL3_HUMLU / M4IS88: Acetate--CoA ligase CCL3; HlCCL3; 2-methylbutanoate--CoA ligase CCL4; 2-methylpropanoate--CoA ligase CCL4; Butanoate--CoA ligase CCL3; Hexanoate--CoA ligase CCL3; Isovalerate--CoA ligase CCL3; Pentanoate--CoA ligase CCL3; Propionate--CoA ligase CCL3; EC 6.2.1.1; EC 6.2.1.-; EC 6.2.1.17 from Humulus lupulus

32% id,
92% cov

More...

AO353_01815: succinyl-CoA synthetase subunit alpha
is similar to:
PaperBLAST

ccsB / Q75VW6: citryl-CoA synthetase small subunit (EC 6.2.1.18) from Hydrogenobacter thermophilus
Q75VW6: citrate-CoA ligase (EC 6.2.1.18) from Hydrogenobacter thermophilus

34% id,
88% cov

AO353_03310: long-chain fatty acid--CoA ligase
is similar to:
PaperBLAST

4CLL1_ARATH / Q9LQ12: 4-coumarate--CoA ligase-like 1; 4-coumarate--CoA ligase isoform 10; At4CL10; EC 6.2.1.12 from Arabidopsis thaliana

31% id,
95% cov

A0A0D4C3L0: 4-coumarate-CoA ligase (EC 6.2.1.12) from Plagiochasma appendiculatum

32% id,
92% cov

U3MJP5: 4-coumarate-CoA ligase (EC 6.2.1.12) from Pueraria montana

30% id,
96% cov

More...

AO353_03315: long-chain fatty acid--CoA ligase
is similar to:
PaperBLAST

4CL2_TOBAC / O24146: 4-coumarate--CoA ligase 2; 4CL 2; Nt4CL-19; Nt4CL-2; 4-coumaroyl-CoA synthase 2; Caffeate--CoA ligase; Cinnamate--CoA ligase; Ferulate--CoA ligase; EC 6.2.1.12; EC 6.2.1.-; EC 6.2.1.34 from Nicotiana tabacum
O24146: 4-coumarate-CoA ligase (EC 6.2.1.12) from Nicotiana tabacum

31% id,
95% cov

4CL2_ORYSJ / Q42982: 4-coumarate--CoA ligase 2; 4CL 2; Os4CL2; (E)-ferulate--CoA ligase; 4-coumaroyl-CoA synthase 2; EC 6.2.1.12; EC 6.2.1.34 from Oryza sativa
Q42982: 4-coumarate-CoA ligase (EC 6.2.1.12) from Oryza sativa

31% id,
93% cov

Ac3H11_3009: Acetoacetate--CoA ligase (EC 6.2.1.16) from Acidovorax sp.

31% id,
89% cov

More...

AO353_15010: long-chain fatty acid--CoA ligase
is similar to:
PaperBLAST

CNL / J9ZU73: cinnamate:CoA ligase (EC 6.2.1.12) from Hypericum calycinum

31% id,
95% cov

HBCL2_METS5 / A4YDR9: 4-hydroxybutyrate--CoA ligase 2; Acetate--CoA ligase; Butyrate--CoA ligase; Propionate--CoA ligase; acyl-activating enzyme; EC 6.2.1.40; EC 6.2.1.1; EC 6.2.1.2; EC 6.2.1.17 from Metallosphaera sedula

30% id,
94% cov

CCL4_HUMLU / M4IQQ5: 2-methylpropanoate--CoA ligase CCL4; HlCCL4; 2-methylbutanoate--CoA ligase CCL4; Butanoate--CoA ligase CCL3; Propionate--CoA ligase CCL3; EC 6.2.1.-; EC 6.2.1.17 from Humulus lupulus
CCL4 / M4IQQ5: isobutanoate/2-methylbutanoate--CoA ligase (EC 6.2.1.1) from Humulus lupulus

28% id,
97% cov

More...

AO353_05780: AMP-dependent synthetase
is similar to:
PaperBLAST

A0A1L7H9I4: 4-coumarate-CoA ligase (EC 6.2.1.12) from Peucedanum praeruptorum

29% id,
95% cov

4CL3_ORYSJ / Q6ETN3: 4-coumarate--CoA ligase 3; 4CL 3; Os4CL3; (E)-ferulate--CoA ligase; 4-coumaroyl-CoA synthase 3; EC 6.2.1.12; EC 6.2.1.34 from Oryza sativa
Q6ETN3: 4-coumarate-CoA ligase (EC 6.2.1.12) from Oryza sativa

31% id,
89% cov

CCL1_HUMLU / M4ISH0: 4-coumarate--CoA ligase CCL1; HlCCL1; EC 6.2.1.12 from Humulus lupulus

30% id,
92% cov

More...

AO353_01820: succinyl-CoA synthetase subunit beta
is similar to:
PaperBLAST

ccsA / Q75VW8: citryl-CoA synthetase large subunit (EC 6.2.1.18) from Hydrogenobacter thermophilus
Q75VW8: citrate-CoA ligase (EC 6.2.1.18) from Hydrogenobacter thermophilus

32% id,
88% cov

AO353_23995: 2,3-dihydroxybenzoate-AMP ligase
is similar to:
PaperBLAST

D5LLN7: 4-coumarate-CoA ligase (EC 6.2.1.12) from Sorbus aucuparia

28% id,
97% cov

A0A1L7H9I4: 4-coumarate-CoA ligase (EC 6.2.1.12) from Peucedanum praeruptorum

27% id,
98% cov

4CL2_ORYSJ / Q42982: 4-coumarate--CoA ligase 2; 4CL 2; Os4CL2; (E)-ferulate--CoA ligase; 4-coumaroyl-CoA synthase 2; EC 6.2.1.12; EC 6.2.1.34 from Oryza sativa
Q42982: 4-coumarate-CoA ligase (EC 6.2.1.12) from Oryza sativa

28% id,
93% cov

More...

AO353_01720: AMP-binding protein
is similar to:
PaperBLAST

U3MJP5: 4-coumarate-CoA ligase (EC 6.2.1.12) from Pueraria montana

26% id,
95% cov

D5LLN7: 4-coumarate-CoA ligase (EC 6.2.1.12) from Sorbus aucuparia

26% id,
95% cov

ACBG2_HUMAN / Q5FVE4: Long-chain-fatty-acid--CoA ligase ACSBG2; Acyl-CoA synthetase bubblegum family member 2; Arachidonate--CoA ligase ACSBG2; Bubblegum-related protein; PRTD-NY3; EC 6.2.1.3; EC 6.2.1.15 from Homo sapiens

26% id,
91% cov

More...

AO353_15125: hypothetical protein
is similar to:
PaperBLAST

A0A1L7H9I4: 4-coumarate-CoA ligase (EC 6.2.1.12) from Peucedanum praeruptorum

25% id,
96% cov

ACSM3_HUMAN / Q53FZ2: Acyl-coenzyme A synthetase ACSM3, mitochondrial; Acyl-CoA synthetase medium-chain family member 3; Butyrate--CoA ligase 3; Butyryl-coenzyme A synthetase 3; Middle-chain acyl-CoA synthetase 3; Propionate--CoA ligase; Protein SA homolog; EC 6.2.1.2; EC 6.2.1.17 from Homo sapiens

26% id,
88% cov

ACSM3_MOUSE / Q3UNX5: Acyl-coenzyme A synthetase ACSM3, mitochondrial; Acyl-CoA synthetase medium-chain family member 3; Butyrate--CoA ligase 3; Butyryl-coenzyme A synthetase 3; Middle-chain acyl-CoA synthetase 3; Propionate--CoA ligase; Protein SA homolog; EC 6.2.1.2; EC 6.2.1.17 from Mus musculus

25% id,
89% cov

More...

AO353_24005: peptide synthetase
is similar to:
PaperBLAST

A0A1L7H9I4: 4-coumarate-CoA ligase (EC 6.2.1.12) from Peucedanum praeruptorum

24% id,
92% cov

ACS2L_HUMAN / Q9NUB1: Acetyl-coenzyme A synthetase 2-like, mitochondrial; Acetate--CoA ligase 2; Acetyl-CoA synthetase 2; AceCS2; Acyl-CoA synthetase short-chain family member 1; Propionate--CoA ligase; EC 6.2.1.1; EC 6.2.1.17 from Homo sapiens
Q9NUB1: acetate-CoA ligase (EC 6.2.1.1) from Homo sapiens

25% id,
81% cov

ACS2L_MOUSE / Q99NB1: Acetyl-coenzyme A synthetase 2-like, mitochondrial; Acetate--CoA ligase 2; Acetyl-CoA synthetase 2; AceCS2; Acyl-CoA synthetase short-chain family member 1; Propionate--CoA ligase; EC 6.2.1.1; EC 6.2.1.17 from Mus musculus
Q99NB1: acetate-CoA ligase (EC 6.2.1.1) from Mus musculus

25% id,
82% cov

More...

AO353_11140: peptide transporter
is similar to:
PaperBLAST

4CLL3_ARATH / Q3E6Y4: 4-coumarate--CoA ligase-like 3; EC 6.2.1.12 from Arabidopsis thaliana

24% id,
89% cov

4CLL6_ARATH / Q84P24: 4-coumarate--CoA ligase-like 6; 4-coumarate--CoA ligase; 4-coumarate--CoA ligase isoform 7; At4CL7; 4-hydroxybenzoate--CoA ligase; EC 6.2.1.-; EC 6.2.1.12; EC 6.2.1.27 from Arabidopsis thaliana

27% id,
61% cov

PPSA_ASPOR / Q2UB01: Acyl-CoA ligase ppsA; 2,4'-dihydroxy-3'-methoxypropiophenone biosynthesis cluster protein A; EC 6.2.1.13; EC 6.2.1.17 from Aspergillus oryzae

26% id,
50% cov

More...

AO353_17770: hypothetical protein
is similar to:
PaperBLAST

A0A1L7H9K1: 4-coumarate-CoA ligase (EC 6.2.1.12) from Peucedanum praeruptorum

24% id,
83% cov

4CL2 / P14913: 4-coumarate--CoA ligase 1 (EC 6.2.1.12) from Petroselinum crispum
P14913: 4-coumarate-CoA ligase (EC 6.2.1.12) from Petroselinum crispum

24% id,
83% cov

4CL1_NARPS / A0A2H5AIX5: 4-coumarate-CoA ligase 1; EC 6.2.1.12 from Narcissus pseudonarcissus

24% id,
82% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 21 reading frames. Except for 3 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

4771311-4773281 (frame -1) on CP012830
is similar to:
PaperBLAST

AACS_RHIME / Q9Z3R3: Acetoacetyl-coenzyme A synthetase; Acetoacetyl-CoA synthetase; EC 6.2.1.16 from Rhizobium meliloti
SMc00774: Acetoacetate--CoA ligase (EC 6.2.1.16) from Sinorhizobium meliloti
Q9Z3R3: acetoacetate-CoA ligase (EC 6.2.1.16) from Sinorhizobium meliloti
Also see hits to annotated proteins above

53% id,
100% cov

AACS_MOUSE / Q9D2R0: Acetoacetyl-CoA synthetase; EC 6.2.1.16 from Mus musculus
Q9D2R0: acetoacetate-CoA ligase (EC 6.2.1.16) from Mus musculus
Also see hits to annotated proteins above

44% id,
99% cov

AACS_RAT / Q9JMI1: Acetoacetyl-CoA synthetase; EC 6.2.1.16 from Rattus norvegicus
Also see hits to annotated proteins above

44% id,
99% cov

More...

706094-708043 (frame -2) on CP012830
is similar to:
PaperBLAST

4CL2_TOBAC / O24146: 4-coumarate--CoA ligase 2; 4CL 2; Nt4CL-19; Nt4CL-2; 4-coumaroyl-CoA synthase 2; Caffeate--CoA ligase; Cinnamate--CoA ligase; Ferulate--CoA ligase; EC 6.2.1.12; EC 6.2.1.-; EC 6.2.1.34 from Nicotiana tabacum
O24146: 4-coumarate-CoA ligase (EC 6.2.1.12) from Nicotiana tabacum
Also see hits to annotated proteins above

31% id,
98% cov

4CL1_PETHY / I3PB37: 4-coumarate:CoA ligase 1; Ph-4CL1; Ph4CL1; (E)-caffeate:CoA ligase 4CL1; Benzoate:CoA ligase 4CL1; Trans-cinnamate:CoA ligase 4CL1; Trans-ferulate:CoA ligase 4CL1; EC 6.2.1.12; EC 6.2.1.-; EC 6.2.1.25 from Petunia hybrida
Also see hits to annotated proteins above

28% id,
98% cov

Q3HUN0: 4-coumarate-CoA ligase (EC 6.2.1.12) from Camellia sinensis
Also see hits to annotated proteins above

30% id,
93% cov

More...

380272-381168 (frame -3) on CP012830
is similar to:
PaperBLAST

ccsB / Q75VW6: citryl-CoA synthetase small subunit (EC 6.2.1.18) from Hydrogenobacter thermophilus
Q75VW6: citrate-CoA ligase (EC 6.2.1.18) from Hydrogenobacter thermophilus
Also see hits to annotated proteins above

33% id,
90% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory