Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E3 (pseudo3_N2E3)

Found 5 curated entries in PaperBLAST's database that match 'anthranilate synthase alpha subunit' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Pseudomonas fluorescens FW300-N2E3, or try another query

AO353_07230: anthranilate synthase
is similar to:
PaperBLAST

trpE / AAA25223.1: anthranilate synthase alpha subunit from Lactococcus lactis

44% id,
98% cov

ASA1_ORYSJ / Q94GF1: Anthranilate synthase alpha subunit 1, chloroplastic; OsASA1; EC 4.1.3.27 from Oryza sativa

43% id,
92% cov

ASA2_ORYSJ / Q9XJ29: Anthranilate synthase alpha subunit 2, chloroplastic; OsASA2; EC 4.1.3.27 from Oryza sativa

42% id,
87% cov

More...

AO353_00925: aminodeoxychorismate synthase component I
is similar to:
PaperBLAST

trpE / AAA25223.1: anthranilate synthase alpha subunit from Lactococcus lactis

34% id,
95% cov

TRPE_ARATH / P32068: Anthranilate synthase alpha subunit 1, chloroplastic; Anthranilate synthase component 1-1; Anthranilate synthase component I-1; Protein A-METHYL TRYPTOPHAN RESISTANT 1; Protein JASMONATE-INDUCED DEFECTIVE LATERAL ROOT 1; Protein TRYPTOPHAN BIOSYNTHESIS 5; Protein WEAK ETHYLENE INSENSITIVE 2; EC 4.1.3.27 from Arabidopsis thaliana

32% id,
81% cov

PHNA_PSEAE / P09785: Anthranilate synthase component 1, pyocyanine specific; AS; ASI; Anthranilate synthase alpha subunit, pyocyanine specific; EC 4.1.3.27 from Pseudomonas aeruginosa

35% id,
74% cov

More...

AO353_24000: isochorismate synthase
is similar to:
PaperBLAST

trpE / AAA25223.1: anthranilate synthase alpha subunit from Lactococcus lactis

26% id,
61% cov

TRPE_ARATH / P32068: Anthranilate synthase alpha subunit 1, chloroplastic; Anthranilate synthase component 1-1; Anthranilate synthase component I-1; Protein A-METHYL TRYPTOPHAN RESISTANT 1; Protein JASMONATE-INDUCED DEFECTIVE LATERAL ROOT 1; Protein TRYPTOPHAN BIOSYNTHESIS 5; Protein WEAK ETHYLENE INSENSITIVE 2; EC 4.1.3.27 from Arabidopsis thaliana

28% id,
49% cov

ASA2_ORYSJ / Q9XJ29: Anthranilate synthase alpha subunit 2, chloroplastic; OsASA2; EC 4.1.3.27 from Oryza sativa

27% id,
48% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory