Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E3 (pseudo3_N2E3)

Found 1 curated entries in PaperBLAST's database that match 'carbamoyl-phosphate synthase%large' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Pseudomonas fluorescens FW300-N2E3, or try another query

AO353_05630: carbamoyl phosphate synthase large subunit
is similar to:
PaperBLAST

carB / CAB56843.1: carbamoyl-phosphate synthase large subunit from Lactobacillus plantarum

45% id,
96% cov

AO353_28810: acetyl-CoA carboxylase biotin carboxylase subunit
is similar to:
PaperBLAST

carB / CAB56843.1: carbamoyl-phosphate synthase large subunit from Lactobacillus plantarum

24% id,
34% cov

AO353_19305: 3-methylcrotonyl-CoA carboxylase
is similar to:
PaperBLAST

carB / CAB56843.1: carbamoyl-phosphate synthase large subunit from Lactobacillus plantarum

23% id,
29% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory