Searching in Pseudomonas fluorescens FW300-N2E3 (pseudo3_N2E3)
Found 1 curated entries in PaperBLAST's database that match 'cystathionine-gamma-lyase' as complete word(s).
These curated entries have 1 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Pseudomonas fluorescens FW300-N2E3, or try another query
| AO353_23295: cystathionine beta-lyase is similar to: | PaperBLAST |
CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea | 48% id, 91% cov |
| AO353_20695: O-succinylhomoserine sulfhydrylase is similar to: | PaperBLAST |
CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea | 39% id, 89% cov |
| AO353_24330: cystathionine beta-lyase is similar to: | PaperBLAST |
CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea | 35% id, 89% cov |
| AO353_24935: cysteine sulfinate desulfinase is similar to: | PaperBLAST |
CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea | 32% id, 17% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 5109186-5110472 (frame +3) on CP012830 is similar to: | PaperBLAST |
CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea | 47% id, 95% cov |
| 5351792-5353000 (frame -2) on CP012830 is similar to: | PaperBLAST |
CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea | 34% id, 92% cov |
Lawrence Berkeley National Laboratory