Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E3 (pseudo3_N2E3)

Found 5 curated entries in PaperBLAST's database that match 'glutamylputrescine oxidase' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Pseudomonas fluorescens FW300-N2E3, or try another query

AO353_20720: gamma-glutamylputrescine oxidoreductase
is similar to:
PaperBLAST

Pf6N2E2_80: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

94% id,
100% cov

AO356_21495: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

93% id,
100% cov

PUUB_ECOLI / P37906: Gamma-glutamylputrescine oxidoreductase; Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase; EC 1.4.3.- from Escherichia coli
YcjA / b1301: γ-glutamylputrescine oxidase from Escherichia coli
puuB / P37906: γ-glutamylputrescine oxidase from Escherichia coli

65% id,
99% cov

AO353_29290: gamma-glutamylputrescine oxidoreductase
is similar to:
PaperBLAST

PUUB_ECOLI / P37906: Gamma-glutamylputrescine oxidoreductase; Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase; EC 1.4.3.- from Escherichia coli
YcjA / b1301: γ-glutamylputrescine oxidase from Escherichia coli
puuB / P37906: γ-glutamylputrescine oxidase from Escherichia coli

68% id,
100% cov

Pf6N2E2_80: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

64% id,
100% cov

AO356_21495: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

63% id,
99% cov

AO353_09170: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

Pf6N2E2_80: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

47% id,
99% cov

AO356_21495: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

47% id,
99% cov

PUUB_ECOLI / P37906: Gamma-glutamylputrescine oxidoreductase; Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase; EC 1.4.3.- from Escherichia coli
YcjA / b1301: γ-glutamylputrescine oxidase from Escherichia coli
puuB / P37906: γ-glutamylputrescine oxidase from Escherichia coli

44% id,
99% cov

AO353_24770: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

Pf6N2E2_80: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

43% id,
100% cov

PUUB_ECOLI / P37906: Gamma-glutamylputrescine oxidoreductase; Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase; EC 1.4.3.- from Escherichia coli
YcjA / b1301: γ-glutamylputrescine oxidase from Escherichia coli
puuB / P37906: γ-glutamylputrescine oxidase from Escherichia coli

43% id,
100% cov

AO356_21495: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

43% id,
99% cov

AO353_27485: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

Pf6N2E2_80: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

41% id,
99% cov

AO356_21495: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

40% id,
99% cov

PUUB_ECOLI / P37906: Gamma-glutamylputrescine oxidoreductase; Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase; EC 1.4.3.- from Escherichia coli
YcjA / b1301: γ-glutamylputrescine oxidase from Escherichia coli
puuB / P37906: γ-glutamylputrescine oxidase from Escherichia coli

39% id,
99% cov

AO353_28275: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

Pf6N2E2_80: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

33% id,
99% cov

PUUB_ECOLI / P37906: Gamma-glutamylputrescine oxidoreductase; Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase; EC 1.4.3.- from Escherichia coli
YcjA / b1301: γ-glutamylputrescine oxidase from Escherichia coli
puuB / P37906: γ-glutamylputrescine oxidase from Escherichia coli

33% id,
99% cov

AO356_21495: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

33% id,
98% cov

AO353_13335: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

PUUB_ECOLI / P37906: Gamma-glutamylputrescine oxidoreductase; Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase; EC 1.4.3.- from Escherichia coli
YcjA / b1301: γ-glutamylputrescine oxidase from Escherichia coli
puuB / P37906: γ-glutamylputrescine oxidase from Escherichia coli

33% id,
90% cov

Pf6N2E2_80: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

31% id,
89% cov

AO356_21495: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

32% id,
85% cov

AO353_24430: amino acid oxidase
is similar to:
PaperBLAST

PUUB_ECOLI / P37906: Gamma-glutamylputrescine oxidoreductase; Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase; EC 1.4.3.- from Escherichia coli
YcjA / b1301: γ-glutamylputrescine oxidase from Escherichia coli
puuB / P37906: γ-glutamylputrescine oxidase from Escherichia coli

27% id,
93% cov

Pf6N2E2_80: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

27% id,
92% cov

AO356_21495: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

27% id,
91% cov

AO353_06225: FAD-binding dehydrogenase
is similar to:
PaperBLAST

PUUB_ECOLI / P37906: Gamma-glutamylputrescine oxidoreductase; Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase; EC 1.4.3.- from Escherichia coli
YcjA / b1301: γ-glutamylputrescine oxidase from Escherichia coli
puuB / P37906: γ-glutamylputrescine oxidase from Escherichia coli

29% id,
33% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 10 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory