Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2C3 (pseudo5_N2C3_1)

Found 6 curated entries in PaperBLAST's database that match '1.1.1.122' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 34 relevant proteins in Pseudomonas fluorescens FW300-N2C3, or try another query

AO356_29900: L-fucose dehydrogenase
is similar to:
PaperBLAST

BPHYT_RS34225: L-fucose dehydrogenase (EC 1.1.1.122) from Burkholderia phytofirmans

40% id,
93% cov

FCDH_PSESP / Q52472: D-threo-aldose 1-dehydrogenase; L-fucose dehydrogenase; EC 1.1.1.122 from Pseudomonas sp.
Q52472: D-threo-aldose 1-dehydrogenase (EC 1.1.1.122) from Pseudomonas sp.

36% id,
98% cov

AO356_30315: 3-oxoacyl-ACP reductase
is similar to:
PaperBLAST

DHB14_HUMAN / Q9BPX1: L-fucose dehydrogenase; 17-beta-hydroxysteroid dehydrogenase DHRS10; Dehydrogenase/reductase SDR family member 10; Retinal short-chain dehydrogenase/reductase retSDR3; Short chain dehydrogenase/reductase family 47C member 1; EC 1.1.1.122 from Homo sapiens

38% id,
91% cov

AO356_24985: 3-oxoacyl-ACP reductase
is similar to:
PaperBLAST

DHB14_HUMAN / Q9BPX1: L-fucose dehydrogenase; 17-beta-hydroxysteroid dehydrogenase DHRS10; Dehydrogenase/reductase SDR family member 10; Retinal short-chain dehydrogenase/reductase retSDR3; Short chain dehydrogenase/reductase family 47C member 1; EC 1.1.1.122 from Homo sapiens

36% id,
90% cov

AO356_22455: oxidoreductase
is similar to:
PaperBLAST

DHB14_HUMAN / Q9BPX1: L-fucose dehydrogenase; 17-beta-hydroxysteroid dehydrogenase DHRS10; Dehydrogenase/reductase SDR family member 10; Retinal short-chain dehydrogenase/reductase retSDR3; Short chain dehydrogenase/reductase family 47C member 1; EC 1.1.1.122 from Homo sapiens

35% id,
91% cov

AO356_20240: short-chain dehydrogenase
is similar to:
PaperBLAST

DHB14_HUMAN / Q9BPX1: L-fucose dehydrogenase; 17-beta-hydroxysteroid dehydrogenase DHRS10; Dehydrogenase/reductase SDR family member 10; Retinal short-chain dehydrogenase/reductase retSDR3; Short chain dehydrogenase/reductase family 47C member 1; EC 1.1.1.122 from Homo sapiens

34% id,
93% cov

AO356_19860: short-chain dehydrogenase
is similar to:
PaperBLAST

DHB14_HUMAN / Q9BPX1: L-fucose dehydrogenase; 17-beta-hydroxysteroid dehydrogenase DHRS10; Dehydrogenase/reductase SDR family member 10; Retinal short-chain dehydrogenase/reductase retSDR3; Short chain dehydrogenase/reductase family 47C member 1; EC 1.1.1.122 from Homo sapiens

34% id,
90% cov

AO356_27315: short-chain dehydrogenase
is similar to:
PaperBLAST

DHB14_HUMAN / Q9BPX1: L-fucose dehydrogenase; 17-beta-hydroxysteroid dehydrogenase DHRS10; Dehydrogenase/reductase SDR family member 10; Retinal short-chain dehydrogenase/reductase retSDR3; Short chain dehydrogenase/reductase family 47C member 1; EC 1.1.1.122 from Homo sapiens

35% id,
89% cov

AO356_01285: oxidoreductase
is similar to:
PaperBLAST

DHB14_HUMAN / Q9BPX1: L-fucose dehydrogenase; 17-beta-hydroxysteroid dehydrogenase DHRS10; Dehydrogenase/reductase SDR family member 10; Retinal short-chain dehydrogenase/reductase retSDR3; Short chain dehydrogenase/reductase family 47C member 1; EC 1.1.1.122 from Homo sapiens

35% id,
89% cov

AO356_26940: dehydrogenase
is similar to:
PaperBLAST

DHB14_HUMAN / Q9BPX1: L-fucose dehydrogenase; 17-beta-hydroxysteroid dehydrogenase DHRS10; Dehydrogenase/reductase SDR family member 10; Retinal short-chain dehydrogenase/reductase retSDR3; Short chain dehydrogenase/reductase family 47C member 1; EC 1.1.1.122 from Homo sapiens

33% id,
92% cov

AO356_20165: 3-ketoacyl-ACP reductase
is similar to:
PaperBLAST

DHB14_HUMAN / Q9BPX1: L-fucose dehydrogenase; 17-beta-hydroxysteroid dehydrogenase DHRS10; Dehydrogenase/reductase SDR family member 10; Retinal short-chain dehydrogenase/reductase retSDR3; Short chain dehydrogenase/reductase family 47C member 1; EC 1.1.1.122 from Homo sapiens

34% id,
89% cov

AO356_29335: sugar dehydrogenase
is similar to:
PaperBLAST

DHB14_HUMAN / Q9BPX1: L-fucose dehydrogenase; 17-beta-hydroxysteroid dehydrogenase DHRS10; Dehydrogenase/reductase SDR family member 10; Retinal short-chain dehydrogenase/reductase retSDR3; Short chain dehydrogenase/reductase family 47C member 1; EC 1.1.1.122 from Homo sapiens

34% id,
88% cov

AO356_22525: oxidoreductase
is similar to:
PaperBLAST

DHB14_HUMAN / Q9BPX1: L-fucose dehydrogenase; 17-beta-hydroxysteroid dehydrogenase DHRS10; Dehydrogenase/reductase SDR family member 10; Retinal short-chain dehydrogenase/reductase retSDR3; Short chain dehydrogenase/reductase family 47C member 1; EC 1.1.1.122 from Homo sapiens

33% id,
90% cov

AO356_21030: oxidoreductase
is similar to:
PaperBLAST

DHB14_HUMAN / Q9BPX1: L-fucose dehydrogenase; 17-beta-hydroxysteroid dehydrogenase DHRS10; Dehydrogenase/reductase SDR family member 10; Retinal short-chain dehydrogenase/reductase retSDR3; Short chain dehydrogenase/reductase family 47C member 1; EC 1.1.1.122 from Homo sapiens

35% id,
84% cov

AO356_28460: short-chain dehydrogenase
is similar to:
PaperBLAST

DHB14_HUMAN / Q9BPX1: L-fucose dehydrogenase; 17-beta-hydroxysteroid dehydrogenase DHRS10; Dehydrogenase/reductase SDR family member 10; Retinal short-chain dehydrogenase/reductase retSDR3; Short chain dehydrogenase/reductase family 47C member 1; EC 1.1.1.122 from Homo sapiens

32% id,
92% cov

AO356_27985: sorbitol dehydrogenase
is similar to:
PaperBLAST

DHB14_HUMAN / Q9BPX1: L-fucose dehydrogenase; 17-beta-hydroxysteroid dehydrogenase DHRS10; Dehydrogenase/reductase SDR family member 10; Retinal short-chain dehydrogenase/reductase retSDR3; Short chain dehydrogenase/reductase family 47C member 1; EC 1.1.1.122 from Homo sapiens

31% id,
90% cov

AO356_20810: oxidoreductase
is similar to:
PaperBLAST

DHB14_HUMAN / Q9BPX1: L-fucose dehydrogenase; 17-beta-hydroxysteroid dehydrogenase DHRS10; Dehydrogenase/reductase SDR family member 10; Retinal short-chain dehydrogenase/reductase retSDR3; Short chain dehydrogenase/reductase family 47C member 1; EC 1.1.1.122 from Homo sapiens

32% id,
89% cov

AO356_27495: short-chain dehydrogenase
is similar to:
PaperBLAST

DHB14_HUMAN / Q9BPX1: L-fucose dehydrogenase; 17-beta-hydroxysteroid dehydrogenase DHRS10; Dehydrogenase/reductase SDR family member 10; Retinal short-chain dehydrogenase/reductase retSDR3; Short chain dehydrogenase/reductase family 47C member 1; EC 1.1.1.122 from Homo sapiens

32% id,
88% cov

AO356_23595: short-chain dehydrogenase
is similar to:
PaperBLAST

DHB14_HUMAN / Q9BPX1: L-fucose dehydrogenase; 17-beta-hydroxysteroid dehydrogenase DHRS10; Dehydrogenase/reductase SDR family member 10; Retinal short-chain dehydrogenase/reductase retSDR3; Short chain dehydrogenase/reductase family 47C member 1; EC 1.1.1.122 from Homo sapiens

30% id,
91% cov

AO356_28680: short-chain dehydrogenase
is similar to:
PaperBLAST

DHB14_HUMAN / Q9BPX1: L-fucose dehydrogenase; 17-beta-hydroxysteroid dehydrogenase DHRS10; Dehydrogenase/reductase SDR family member 10; Retinal short-chain dehydrogenase/reductase retSDR3; Short chain dehydrogenase/reductase family 47C member 1; EC 1.1.1.122 from Homo sapiens

30% id,
90% cov

AO356_24895: butanediol dehydrogenase
is similar to:
PaperBLAST

Q97YM2: D-threo-aldose 1-dehydrogenase (EC 1.1.1.122) from Saccharolobus solfataricus

28% id,
99% cov

AO356_25520: 3-oxoacyl-ACP reductase
is similar to:
PaperBLAST

DHB14_HUMAN / Q9BPX1: L-fucose dehydrogenase; 17-beta-hydroxysteroid dehydrogenase DHRS10; Dehydrogenase/reductase SDR family member 10; Retinal short-chain dehydrogenase/reductase retSDR3; Short chain dehydrogenase/reductase family 47C member 1; EC 1.1.1.122 from Homo sapiens

30% id,
90% cov

AO356_05920: S-(hydroxymethyl)glutathione dehydrogenase
is similar to:
PaperBLAST

Q97YM2: D-threo-aldose 1-dehydrogenase (EC 1.1.1.122) from Saccharolobus solfataricus

28% id,
96% cov

AO356_00820: alcohol dehydrogenase
is similar to:
PaperBLAST

Q97YM2: D-threo-aldose 1-dehydrogenase (EC 1.1.1.122) from Saccharolobus solfataricus

27% id,
97% cov

AO356_26345: 3-hydroxy-2-methylbutyryl-CoA dehydrogenase
is similar to:
PaperBLAST

DHB14_HUMAN / Q9BPX1: L-fucose dehydrogenase; 17-beta-hydroxysteroid dehydrogenase DHRS10; Dehydrogenase/reductase SDR family member 10; Retinal short-chain dehydrogenase/reductase retSDR3; Short chain dehydrogenase/reductase family 47C member 1; EC 1.1.1.122 from Homo sapiens

29% id,
89% cov

AO356_10220: 3-ketoacyl-ACP reductase
is similar to:
PaperBLAST

DHB14_HUMAN / Q9BPX1: L-fucose dehydrogenase; 17-beta-hydroxysteroid dehydrogenase DHRS10; Dehydrogenase/reductase SDR family member 10; Retinal short-chain dehydrogenase/reductase retSDR3; Short chain dehydrogenase/reductase family 47C member 1; EC 1.1.1.122 from Homo sapiens

29% id,
89% cov

AO356_17250: short-chain dehydrogenase
is similar to:
PaperBLAST

DHB14_HUMAN / Q9BPX1: L-fucose dehydrogenase; 17-beta-hydroxysteroid dehydrogenase DHRS10; Dehydrogenase/reductase SDR family member 10; Retinal short-chain dehydrogenase/reductase retSDR3; Short chain dehydrogenase/reductase family 47C member 1; EC 1.1.1.122 from Homo sapiens

26% id,
96% cov

AO356_11565: oxidoreductase
is similar to:
PaperBLAST

DHB14_HUMAN / Q9BPX1: L-fucose dehydrogenase; 17-beta-hydroxysteroid dehydrogenase DHRS10; Dehydrogenase/reductase SDR family member 10; Retinal short-chain dehydrogenase/reductase retSDR3; Short chain dehydrogenase/reductase family 47C member 1; EC 1.1.1.122 from Homo sapiens

27% id,
90% cov

AO356_22855: NADP-dependent oxidoreductase
is similar to:
PaperBLAST

FCDH_PSESP / Q52472: D-threo-aldose 1-dehydrogenase; L-fucose dehydrogenase; EC 1.1.1.122 from Pseudomonas sp.
Q52472: D-threo-aldose 1-dehydrogenase (EC 1.1.1.122) from Pseudomonas sp.

26% id,
92% cov

AO356_23385: short-chain dehydrogenase
is similar to:
PaperBLAST

DHB14_HUMAN / Q9BPX1: L-fucose dehydrogenase; 17-beta-hydroxysteroid dehydrogenase DHRS10; Dehydrogenase/reductase SDR family member 10; Retinal short-chain dehydrogenase/reductase retSDR3; Short chain dehydrogenase/reductase family 47C member 1; EC 1.1.1.122 from Homo sapiens

26% id,
89% cov

AO356_03500: 3-oxoacyl-ACP reductase
is similar to:
PaperBLAST

DHB14_HUMAN / Q9BPX1: L-fucose dehydrogenase; 17-beta-hydroxysteroid dehydrogenase DHRS10; Dehydrogenase/reductase SDR family member 10; Retinal short-chain dehydrogenase/reductase retSDR3; Short chain dehydrogenase/reductase family 47C member 1; EC 1.1.1.122 from Homo sapiens

30% id,
68% cov

AO356_20670: 3-oxoacyl-ACP reductase
is similar to:
PaperBLAST

DHB14_HUMAN / Q9BPX1: L-fucose dehydrogenase; 17-beta-hydroxysteroid dehydrogenase DHRS10; Dehydrogenase/reductase SDR family member 10; Retinal short-chain dehydrogenase/reductase retSDR3; Short chain dehydrogenase/reductase family 47C member 1; EC 1.1.1.122 from Homo sapiens

30% id,
67% cov

AO356_07620: short-chain dehydrogenase
is similar to:
PaperBLAST

DHB14_HUMAN / Q9BPX1: L-fucose dehydrogenase; 17-beta-hydroxysteroid dehydrogenase DHRS10; Dehydrogenase/reductase SDR family member 10; Retinal short-chain dehydrogenase/reductase retSDR3; Short chain dehydrogenase/reductase family 47C member 1; EC 1.1.1.122 from Homo sapiens

29% id,
68% cov

AO356_25330: short-chain dehydrogenase
is similar to:
PaperBLAST

DHB14_HUMAN / Q9BPX1: L-fucose dehydrogenase; 17-beta-hydroxysteroid dehydrogenase DHRS10; Dehydrogenase/reductase SDR family member 10; Retinal short-chain dehydrogenase/reductase retSDR3; Short chain dehydrogenase/reductase family 47C member 1; EC 1.1.1.122 from Homo sapiens

28% id,
70% cov

AO356_10760: quinone oxidoreductase
is similar to:
PaperBLAST

Q97YM2: D-threo-aldose 1-dehydrogenase (EC 1.1.1.122) from Saccharolobus solfataricus

34% id,
23% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 29 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory