Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2C3 (pseudo5_N2C3_1)

Found 19 curated entries in PaperBLAST's database that match '1.1.1.18' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Pseudomonas fluorescens FW300-N2C3, or try another query

AO356_23190: inositol 2-dehydrogenase
is similar to:
PaperBLAST

AO356_23190: Inositol 2-dehydrogenase (EC 1.1.1.18) from Pseudomonas fluorescens

100% id,
100% cov

AO353_21365: Inositol 2-dehydrogenase (EC 1.1.1.18) from Pseudomonas fluorescens

97% id,
100% cov

PS417_11875: Inositol 2-dehydrogenase (EC 1.1.1.18) from Pseudomonas simiae

93% id,
100% cov

More...

AO356_29215: dehydrogenase
is similar to:
PaperBLAST

IOLG_THEMA / Q9WYP5: Myo-inositol 2-dehydrogenase; EC 1.1.1.18 from Thermotoga maritima
iolG / Q9WYP5: myo-inositol 2-dehydrogenase (EC 1.1.1.18) from Thermotoga maritima

39% id,
100% cov

HSERO_RS12095: Myo-inositol 2-dehydrogenase (EC 1.1.1.18) from Herbaspirillum seropedicae

35% id,
100% cov

MI2D_RHIME / O68965: Inositol 2-dehydrogenase; Myo-inositol 2-dehydrogenase; MI-dehydrogenase; EC 1.1.1.18 from Rhizobium meliloti
SM_b20899: Inositol 2-dehydrogenase (EC 1.1.1.18) from Sinorhizobium meliloti
O68965: inositol 2-dehydrogenase (EC 1.1.1.18) from Sinorhizobium meliloti

33% id,
99% cov

More...

AO356_27260: myo-inositol 2-dehydrogenase
is similar to:
PaperBLAST

BWI76_RS03095: Inositol 2-dehydrogenase (EC 1.1.1.18) from Klebsiella michiganensis

37% id,
100% cov

iolG / A0A0H3FQ94: myo-inositol 2-dehydrogenase (EC 1.1.1.18) from Klebsiella aerogenes

36% id,
100% cov

AO353_21365: Inositol 2-dehydrogenase (EC 1.1.1.18) from Pseudomonas fluorescens

36% id,
100% cov

More...

AO356_23320: 1-carboxy-3-chloro-3,4-dihydroxycyclo hexa-1,5-diene dehydrogenase
is similar to:
PaperBLAST

Q5KYQ3: inositol 2-dehydrogenase (EC 1.1.1.18) from Geobacillus kaustophilus

33% id,
97% cov

Q9EZV8: inositol 2-dehydrogenase (EC 1.1.1.18) from Sinorhizobium fredii

26% id,
99% cov

MI2D_RHIME / O68965: Inositol 2-dehydrogenase; Myo-inositol 2-dehydrogenase; MI-dehydrogenase; EC 1.1.1.18 from Rhizobium meliloti
SM_b20899: Inositol 2-dehydrogenase (EC 1.1.1.18) from Sinorhizobium meliloti
O68965: inositol 2-dehydrogenase (EC 1.1.1.18) from Sinorhizobium meliloti

26% id,
99% cov

More...

AO356_22290: oxidoreductase
is similar to:
PaperBLAST

Q5KYQ3: inositol 2-dehydrogenase (EC 1.1.1.18) from Geobacillus kaustophilus

27% id,
93% cov

E1U888: inositol 2-dehydrogenase (EC 1.1.1.18) from Lacticaseibacillus casei

22% id,
76% cov

AO356_23195: oxidoreductase
is similar to:
PaperBLAST

IOLG_THEMA / Q9WYP5: Myo-inositol 2-dehydrogenase; EC 1.1.1.18 from Thermotoga maritima
iolG / Q9WYP5: myo-inositol 2-dehydrogenase (EC 1.1.1.18) from Thermotoga maritima

23% id,
100% cov

AO356_21760: oxidoreductase
is similar to:
PaperBLAST

IOLG_THEMA / Q9WYP5: Myo-inositol 2-dehydrogenase; EC 1.1.1.18 from Thermotoga maritima
iolG / Q9WYP5: myo-inositol 2-dehydrogenase (EC 1.1.1.18) from Thermotoga maritima

29% id,
74% cov

E1U887: inositol 2-dehydrogenase (EC 1.1.1.18) from Lacticaseibacillus casei

24% id,
75% cov

E1U888: inositol 2-dehydrogenase (EC 1.1.1.18) from Lacticaseibacillus casei

26% id,
61% cov

AO356_28440: galactose 1-dehydrogenase
is similar to:
PaperBLAST

Q5KYQ3: inositol 2-dehydrogenase (EC 1.1.1.18) from Geobacillus kaustophilus

26% id,
51% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory