Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2C3 (pseudo5_N2C3_1)

Found 30 curated entries in PaperBLAST's database that match '1.1.1.307' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Pseudomonas fluorescens FW300-N2C3, or try another query

AO356_28450: aldo/keto reductase
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

37% id,
90% cov

AO356_17050: aldo/keto reductase
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

32% id,
91% cov

A0A0S2PJI4: D-xylose reductase (EC 1.1.1.307) from Spathaspora passalidarum

28% id,
90% cov

XYL1_PICST / P31867: NAD(P)H-dependent D-xylose reductase; XR; EC 1.1.1.307 from Scheffersomyces stipitis
XYL1 / P31867: NAD(P)H-dependent D-xylose reductase (EC 1.1.1.21; EC 1.1.1.307) from Scheffersomyces stipitis
P31867: D-xylose reductase (EC 1.1.1.307) from Scheffersomyces stipitis

28% id,
85% cov

More...

AO356_01320: oxidoreductase
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

31% id,
94% cov

A0A0S2PJI4: D-xylose reductase (EC 1.1.1.307) from Spathaspora passalidarum

30% id,
95% cov

I7HD84: D-xylose reductase (EC 1.1.1.307) from Rhizomucor pusillus

28% id,
94% cov

More...

AO356_23370: aldo/keto reductase
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

33% id,
88% cov

AO356_10210: L-glyceraldehyde 3-phosphate reductase
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

31% id,
93% cov

AO356_22855: NADP-dependent oxidoreductase
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

32% id,
91% cov

AO356_29740: oxidoreductase
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

30% id,
94% cov

AO356_30200: aldo/keto reductase
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

26% id,
84% cov

AO356_08840: aldo/keto reductase
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

39% id,
53% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 9 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory