Searching in Pseudomonas fluorescens FW300-N2C3 (pseudo5_N2C3_1)
Found 4 curated entries in PaperBLAST's database that match '1.1.1.312' as complete word(s).
These curated entries have 3 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Pseudomonas fluorescens FW300-N2C3, or try another query
| AO356_29215: dehydrogenase is similar to: | PaperBLAST |
Q93PS4: 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase (EC 1.1.1.312) from Comamonas testosteroni | 24% id, 93% cov |
proD / Q75T27: α-hydroxy-γ-carboxymuconate ε-semialdehyde dehydrogenase subunit (EC 1.1.1.312) from Pseudomonas straminea | 27% id, 73% cov |
| AO356_27260: myo-inositol 2-dehydrogenase is similar to: | PaperBLAST |
proD / Q75T27: α-hydroxy-γ-carboxymuconate ε-semialdehyde dehydrogenase subunit (EC 1.1.1.312) from Pseudomonas straminea | 25% id, 82% cov |
Q93PS4: 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase (EC 1.1.1.312) from Comamonas testosteroni | 26% id, 77% cov |
| AO356_28440: galactose 1-dehydrogenase is similar to: | PaperBLAST |
LIGC_SPHSK / Q9KWL3: 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase; CHMS dehydrogenase; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase; EC 1.1.1.312 from Sphingobium sp. | 25% id, 46% cov |
Q93PS4: 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase (EC 1.1.1.312) from Comamonas testosteroni | 30% id, 23% cov |
proD / Q75T27: α-hydroxy-γ-carboxymuconate ε-semialdehyde dehydrogenase subunit (EC 1.1.1.312) from Pseudomonas straminea | 30% id, 23% cov |
| AO356_23190: inositol 2-dehydrogenase is similar to: | PaperBLAST |
Q93PS4: 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase (EC 1.1.1.312) from Comamonas testosteroni | 26% id, 45% cov |
proD / Q75T27: α-hydroxy-γ-carboxymuconate ε-semialdehyde dehydrogenase subunit (EC 1.1.1.312) from Pseudomonas straminea | 25% id, 45% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 6213758-6214789 (frame +2) on CP012831 is similar to: | PaperBLAST |
LIGC_SPHSK / Q9KWL3: 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase; CHMS dehydrogenase; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase; EC 1.1.1.312 from Sphingobium sp. | 28% id, 74% cov |
Lawrence Berkeley National Laboratory