Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2C3 (pseudo5_N2C3_1)

Found 11 curated entries in PaperBLAST's database that match '1.1.1.67' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 32 relevant proteins in Pseudomonas fluorescens FW300-N2C3, or try another query

AO356_27690: mannitol dehydrogenase
is similar to:
PaperBLAST

O08355: mannitol 2-dehydrogenase (EC 1.1.1.67) from Pseudomonas fluorescens

87% id,
99% cov

M2DH_ASPFU / Q4WQY4: Mannitol 2-dehydrogenase; M2DH; MDH; EC 1.1.1.67 from Aspergillus fumigatus
Q4WQY4: mannitol 2-dehydrogenase (EC 1.1.1.67) from Aspergillus fumigatus

45% id,
99% cov

DSF1_YEAST / P0CX08: Mannitol dehydrogenase DSF1; Deletion suppressor of MPT5 mutation protein 1; EC 1.1.1.67 from Saccharomyces cerevisiae
MAN2_YEAST / P0CX09: Mannitol dehydrogenase 2; EC 1.1.1.67 from Saccharomyces cerevisiae

43% id,
97% cov

More...

AO356_28535: mannitol dehydrogenase
is similar to:
PaperBLAST

O08355: mannitol 2-dehydrogenase (EC 1.1.1.67) from Pseudomonas fluorescens

39% id,
97% cov

M2DH_ASPFU / Q4WQY4: Mannitol 2-dehydrogenase; M2DH; MDH; EC 1.1.1.67 from Aspergillus fumigatus
Q4WQY4: mannitol 2-dehydrogenase (EC 1.1.1.67) from Aspergillus fumigatus

34% id,
94% cov

DSF1_YEAST / P0CX08: Mannitol dehydrogenase DSF1; Deletion suppressor of MPT5 mutation protein 1; EC 1.1.1.67 from Saccharomyces cerevisiae
MAN2_YEAST / P0CX09: Mannitol dehydrogenase 2; EC 1.1.1.67 from Saccharomyces cerevisiae

35% id,
90% cov

More...

AO356_27315: short-chain dehydrogenase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

34% id,
92% cov

AO356_21080: sugar dehydrogenase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

34% id,
94% cov

AO356_28545: alcohol dehydrogenase
is similar to:
PaperBLAST

Q8KQG6: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc mesenteroides

32% id,
97% cov

Q6ECH5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Limosilactobacillus reuteri

31% id,
99% cov

Q83VI5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc pseudomesenteroides

31% id,
97% cov

AO356_25515: 3-ketoacyl-ACP reductase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

31% id,
95% cov

AO356_09105: short-chain dehydrogenase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

32% id,
93% cov

AO356_20165: 3-ketoacyl-ACP reductase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

32% id,
93% cov

AO356_19860: short-chain dehydrogenase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

31% id,
94% cov

AO356_23325: short-chain dehydrogenase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

30% id,
95% cov

AO356_27495: short-chain dehydrogenase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

31% id,
91% cov

AO356_01285: oxidoreductase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

30% id,
91% cov

AO356_09100: 3-oxoacyl-ACP reductase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

31% id,
87% cov

AO356_24200: dehydrogenase
is similar to:
PaperBLAST

Q83VI5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc pseudomesenteroides

29% id,
93% cov

AO356_16785: serine/threonine protein kinase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

29% id,
93% cov

AO356_20810: oxidoreductase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

29% id,
93% cov

AO356_22525: oxidoreductase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

29% id,
93% cov

AO356_24895: butanediol dehydrogenase
is similar to:
PaperBLAST

Q6ECH5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Limosilactobacillus reuteri

27% id,
98% cov

Q83VI5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc pseudomesenteroides

28% id,
95% cov

Q8KQG6: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc mesenteroides

26% id,
95% cov

AO356_00820: alcohol dehydrogenase
is similar to:
PaperBLAST

Q8KQG6: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc mesenteroides

27% id,
95% cov

Q6ECH5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Limosilactobacillus reuteri

25% id,
93% cov

AO356_23595: short-chain dehydrogenase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

27% id,
94% cov

AO356_28460: short-chain dehydrogenase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

27% id,
92% cov

AO356_08105: 3-ketoacyl-ACP reductase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

26% id,
92% cov

AO356_29335: sugar dehydrogenase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

26% id,
91% cov

AO356_30315: 3-oxoacyl-ACP reductase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

26% id,
92% cov

AO356_05920: S-(hydroxymethyl)glutathione dehydrogenase
is similar to:
PaperBLAST

Q83VI5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc pseudomesenteroides

25% id,
93% cov

Q8KQG6: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc mesenteroides

24% id,
93% cov

Q6ECH5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Limosilactobacillus reuteri

24% id,
83% cov

AO356_29495: NADPH:quinone oxidoreductase
is similar to:
PaperBLAST

Q83VI5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc pseudomesenteroides

23% id,
98% cov

Q6ECH5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Limosilactobacillus reuteri

31% id,
35% cov

Q8KQG6: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc mesenteroides

29% id,
35% cov

AO356_29985: alcohol dehydrogenase
is similar to:
PaperBLAST

Q8KQG6: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc mesenteroides

23% id,
94% cov

AO356_14000: aldehyde dismutase
is similar to:
PaperBLAST

Q8KQG6: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc mesenteroides

26% id,
69% cov

Q83VI5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc pseudomesenteroides

26% id,
69% cov

Q6ECH5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Limosilactobacillus reuteri

25% id,
70% cov

AO356_20305: hydroxyacid dehydrogenase
is similar to:
PaperBLAST

Q6ECH5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Limosilactobacillus reuteri

30% id,
60% cov

Q83VI5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc pseudomesenteroides

26% id,
53% cov

AO356_18645: quinone oxidoreductase
is similar to:
PaperBLAST

Q83VI5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc pseudomesenteroides

28% id,
48% cov

AO356_27080: alcohol dehydrogenase
is similar to:
PaperBLAST

Q83VI5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc pseudomesenteroides

33% id,
25% cov

AO356_12960: NADPH:quinone oxidoreductase
is similar to:
PaperBLAST

Q8KQG6: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc mesenteroides

35% id,
22% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 24 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2061604-2062989 (frame -1) on CP012831
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina
Also see hits to annotated proteins above

32% id,
99% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory