Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2C3 (pseudo5_N2C3_1)

Found 22 curated entries in PaperBLAST's database that match '1.14.13.9' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Pseudomonas fluorescens FW300-N2C3, or try another query

AO356_28285: 2-polyprenyl-6-methoxyphenol hydroxylase
is similar to:		 PaperBLAST

KMO_AEDAE / Q86PM2: Kynurenine 3-monooxygenase; Kynurenine 3-hydroxylase; EC 1.14.13.9 from Aedes aegypti
Q86PM2: kynurenine 3-monooxygenase (EC 1.14.13.9) from Aedes aegypti

 22% id,
79% cov

Q8ISJ5: kynurenine 3-monooxygenase (EC 1.14.13.9) from Anopheles stephensi

 22% id,
79% cov

KMO_CYTH3 / Q11PP7: Kynurenine 3-monooxygenase; Kynurenine 3-hydroxylase; EC 1.14.13.9 from Cytophaga hutchinsonii
Q11PP7: kynurenine 3-monooxygenase (EC 1.14.13.9) from Cytophaga hutchinsonii

 23% id,
72% cov

More...

AO356_29155: 2-polyprenyl-6-methoxyphenol hydroxylase
is similar to:		 PaperBLAST

KMO_CYTH3 / Q11PP7: Kynurenine 3-monooxygenase; Kynurenine 3-hydroxylase; EC 1.14.13.9 from Cytophaga hutchinsonii
Q11PP7: kynurenine 3-monooxygenase (EC 1.14.13.9) from Cytophaga hutchinsonii

 27% id,
62% cov

KMO_AEDAE / Q86PM2: Kynurenine 3-monooxygenase; Kynurenine 3-hydroxylase; EC 1.14.13.9 from Aedes aegypti
Q86PM2: kynurenine 3-monooxygenase (EC 1.14.13.9) from Aedes aegypti

 34% id,
25% cov

KMO_RAT / O88867: Kynurenine 3-monooxygenase; Kynurenine 3-hydroxylase; EC 1.14.13.9 from Rattus norvegicus
O88867: kynurenine 3-monooxygenase (EC 1.14.13.9) from Rattus norvegicus

 33% id,
21% cov

More...

AO356_13020: 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase
is similar to:		 PaperBLAST

KMO_HUMAN / O15229: Kynurenine 3-monooxygenase; Kynurenine 3-hydroxylase; EC 1.14.13.9 from Homo sapiens
KMO / O15229: kynurenine 3-monooxygenase (EC 1.14.13.9) from Homo sapiens
O15229: kynurenine 3-monooxygenase (EC 1.14.13.9) from Homo sapiens

 23% id,
67% cov

Q9MZS9: kynurenine 3-monooxygenase (EC 1.14.13.9) from Sus scrofa

 23% id,
37% cov

KMO_RAT / O88867: Kynurenine 3-monooxygenase; Kynurenine 3-hydroxylase; EC 1.14.13.9 from Rattus norvegicus
O88867: kynurenine 3-monooxygenase (EC 1.14.13.9) from Rattus norvegicus

 34% id,
16% cov

More...

AO356_28655: 3-(3-hydroxyphenyl)propionate hydroxylase
is similar to:		 PaperBLAST

ACDD_ASPCN / A0A2I2F284: Kynurenine 3-monooxygenase acdD; Aspcandine biosynthesis gene cluster protein D; Kynurenine 3-hydroxylase acdD; EC 1.14.13.9 from Aspergillus candidus

 24% id,
44% cov

AO356_26245: energy transducer TonB
is similar to:		 PaperBLAST

A1Z745: kynurenine 3-monooxygenase (EC 1.14.13.9) from Drosophila melanogaster

 27% id,
14% cov

AO356_26780: D-amino acid oxidase
is similar to:		 PaperBLAST

Q95NP6: kynurenine 3-monooxygenase (EC 1.14.13.9) from Tribolium castaneum

 52% id,
7% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

6571847-6573010 (frame +2) on CP012831
is similar to:		 PaperBLAST

KMO_AEDAE / Q86PM2: Kynurenine 3-monooxygenase; Kynurenine 3-hydroxylase; EC 1.14.13.9 from Aedes aegypti
Q86PM2: kynurenine 3-monooxygenase (EC 1.14.13.9) from Aedes aegypti
Also see hits to annotated proteins above

 22% id,
82% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory