Searching in Pseudomonas fluorescens FW300-N2C3 (pseudo5_N2C3_1)
Found 14 curated entries in PaperBLAST's database that match '1.2.1.41' as complete word(s).
These curated entries have 9 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Pseudomonas fluorescens FW300-N2C3, or try another query
AO356_15290: gamma-glutamyl phosphate reductase is similar to: | PaperBLAST |
PROA_ECOLI / P07004: Gamma-glutamyl phosphate reductase; GPR; Glutamate-5-semialdehyde dehydrogenase; Glutamyl-gamma-semialdehyde dehydrogenase; GSA dehydrogenase; EC 1.2.1.41 from Escherichia coli | 45% id, 100% cov |
A7Y114: glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) from Halobacillus halophilus | 45% id, 96% cov |
Echvi_2633: gamma-glutamylphosphate reductase (EC 1.2.1.41) from Echinicola vietnamensis | 37% id, 99% cov |
AO356_15815: gamma-glutamyl kinase is similar to: | PaperBLAST |
P5CS1_ORYSJ / O04226: Delta-1-pyrroline-5-carboxylate synthase 1; OsP5CS1; EC 2.7.2.11; EC 1.2.1.41 from Oryza sativa | 30% id, 46% cov |
P5CS_HUMAN / P54886: Delta-1-pyrroline-5-carboxylate synthase; P5CS; Aldehyde dehydrogenase family 18 member A1; EC 2.7.2.11; EC 1.2.1.41 from Homo sapiens | 35% id, 37% cov |
P5CS_MOUSE / Q9Z110: Delta-1-pyrroline-5-carboxylate synthase; P5CS; Aldehyde dehydrogenase family 18 member A1; EC 2.7.2.11; EC 1.2.1.41 from Mus musculus | 35% id, 37% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
3582092-3583399 (frame +2) on CP012831 is similar to: | PaperBLAST |
P5CS_MOUSE / Q9Z110: Delta-1-pyrroline-5-carboxylate synthase; P5CS; Aldehyde dehydrogenase family 18 member A1; EC 2.7.2.11; EC 1.2.1.41 from Mus musculus | 32% id, 44% cov |
P5CS1 / P54887: δ1-pyrroline-5-carboxylate synthetase (EC 1.2.1.41; EC 2.7.2.11) from Arabidopsis thaliana | 32% id, 40% cov |
Lawrence Berkeley National Laboratory