Searching in Pseudomonas fluorescens FW300-N2C3 (pseudo5_N2C3_1)
Found 13 curated entries in PaperBLAST's database that match '1.3.1.12' as complete word(s).
These curated entries have 12 distinct sequences.
Running ublast with E ≤ 0.01
Found 7 relevant proteins in Pseudomonas fluorescens FW300-N2C3, or try another query
| AO356_08965: dihydrolipoamide acetyltransferase is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 54% id, 83% cov |
| AO356_03455: 3-phosphoshikimate 1-carboxyvinyltransferase is similar to: | PaperBLAST |
J9XQS6: prephenate dehydrogenase (EC 1.3.1.12) from uncultured bacterium | 41% id, 92% cov |
TYRC_ZYMMO / Q04983: Cyclohexadienyl dehydrogenase; Arogenate dehydrogenase; ADH; Prephenate dehydrogenase; PDH; EC 1.3.1.43; EC 1.3.1.12 from Zymomonas mobilis | 39% id, 95% cov |
O67636: prephenate dehydrogenase (EC 1.3.1.12) from Aquifex aeolicus | 39% id, 89% cov |
| AO356_19700: dihydrolipoamide succinyltransferase is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 34% id, 68% cov |
| AO356_22980: branched-chain alpha-keto acid dehydrogenase subunit E2 is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 32% id, 67% cov |
| AO356_03465: prephenate dehydratase is similar to: | PaperBLAST |
O30012: prephenate dehydrogenase (EC 1.3.1.12); prephenate dehydratase (EC 4.2.1.51); chorismate mutase (EC 5.4.99.5) from Archaeoglobus fulgidus | 33% id, 57% cov |
| AO356_04670: urea carboxylase is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 33% id, 17% cov |
| AO356_18320: hypothetical protein is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 35% id, 13% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 767725-769980 (frame -1) on CP012831 is similar to: | PaperBLAST |
J9XQS6: prephenate dehydrogenase (EC 1.3.1.12) from uncultured bacterium | 40% id, 94% cov |
Lawrence Berkeley National Laboratory